ID JF911392; SV 1; linear; genomic DNA; STD; VRL; 1230 BP. XX AC JF911392; XX DT 10-OCT-2011 (Rel. 110, Created) DT 10-OCT-2011 (Rel. 110, Last updated, Version 1) XX DE Banana streak Mysore virus isolate Ke176 ORF III polyprotein gene, partial DE cds. XX KW . XX OS Banana streak MY virus OC Viruses; Ortervirales; Caulimoviridae; Badnavirus. XX RN [1] RP 1-1230 RA James A.P., Giejskes R.J., Harding R.M., Dale J.L., Karanja L., Mugini J., RA Kubiriba J., Changa C.M., Tushemereirwe W.; RT "Surveying for banana viruses in East Africa and comparison of PCR and RT RCA-based methods for badnavirus detection"; RL Unpublished. XX RN [2] RP 1-1230 RA James A.P., Giejskes R.J., Harding R.M., Dale J.L., Karanja L., Mugini J., RA Kubiriba J., Changa C.M., Tushemereirwe W.; RT ; RL Submitted (03-MAY-2011) to the INSDC. RL Centre for Tropical Crops and Biocommodities, Queensland University of RL Technology, 2 George St, Brisbane, Queensland 4001, Australia XX DR MD5; df820db36b79c20f1272b3d9a59f9113. XX FH Key Location/Qualifiers FH FT source 1..1230 FT /organism="Banana streak MY virus" FT /host="Musa sp. cv. Cavendish" FT /isolate="Ke176" FT /mol_type="genomic DNA" FT /country="Kenya" FT /collection_date="30-Mar-2009" FT /db_xref="taxon:1476909" FT CDS <1..>1230 FT /codon_start=1 FT /product="ORF III polyprotein" FT /note="contains reverse transcriptase and RNaseH" FT /db_xref="GOA:G4XUM6" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR002156" FT /db_xref="InterPro:IPR041373" FT /db_xref="UniProtKB/TrEMBL:G4XUM6" FT /protein_id="AEP82786.1" FT /translation="LMQLKVIRPSSSRHRTTAMIVESGTEVDPKTGQEKRGKERLVFNF FT KRLNDNTEKDQYSLPGINTIISRIGNAKVYSKFDLKSGFHQVAMDPESISWTAFLANNE FT LYEWLVMPFGLKNAPAIFQRKMDTCFKGTEAFIAVYIDDILVFSETEQLHRDHLRKFLE FT ISKANGLILSPTKMKIGVKTIDFLGASIGNSKIKLQPHIIKKIADFDDHRLKETKGLRA FT WLGILNYARNYIPNLGKTLGPLYSKISPNGEKRMNAQDWALVTQVKRQVQNLPELELPP FT EKCKMVIETDGCMEGWGGVCKWTTVGKAQEKVCAYASGKFTPIKSTIDAEVQAVINSLD FT KFKIYYLDKKELLIRTDCEAIVRFYKSTAQNKPSRVRWLMLTDFISGTGLEIKFEHING FT CENILADSLSR" XX SQ Sequence 1230 BP; 421 A; 250 C; 272 G; 287 T; 0 other; ctgatgcaat tgaaagtgat cagaccctca tccagtcgac acaggaccac tgccatgatt 60 gttgaaagcg gaacagaagt ggatccaaag acaggacaag aaaagagagg aaaagaaaga 120 ttggtcttca acttcaagag actgaatgac aatactgaga aagaccaata ctccctccca 180 ggaataaaca cgattatcag tcgaattgga aatgccaaag tttattcaaa attcgactta 240 aaaagtggtt tccatcaagt agccatggat cctgaatcca tctcatggac ggctttcctg 300 gctaacaatg agctctatga gtggcttgtc atgcccttcg gtctgaagaa tgctccagca 360 atattccaac gaaagatgga cacctgtttt aaaggtactg aagccttcat tgctgtttat 420 atagatgata ttttagtatt ttctgagacc gaacagttgc atagagacca cttaagaaaa 480 ttcctggaaa tcagtaaggc caatgggctc atattaagcc caaccaagat gaaaataggg 540 gtcaaaacta ttgacttcct aggagcctct ataggaaact ccaagatcaa gcttcagcct 600 catattatca agaaaatagc tgacttcgac gatcataggc tgaaagaaac aaaaggtttg 660 agggcatggc ttgggatatt aaactatgca agaaactaca tcccaaactt aggaaaaact 720 ctaggccctc tttactctaa gatatcacca aatggggaga aaagaatgaa cgctcaggat 780 tgggcactag tcactcaggt taaaagacaa gtccagaacc taccagagct ggaattaccc 840 ccagaaaaat gtaaaatggt gatagaaacg gacggctgca tggaaggttg gggcggcgtc 900 tgtaagtgga ctactgtcgg caaggcacaa gaaaaagtat gcgcctatgc cagtggaaag 960 tttaccccca tcaaaagcac tattgatgcg gaggtacagg ctgtaattaa cagccttgat 1020 aagttcaaaa tatactattt ggacaagaag gagttattga tcagaacaga ctgtgaagcc 1080 atagtcaggt tctataaaag cacagctcag aacaaaccct cccgggttag atggctcatg 1140 ctgaccgact tcatctcggg tacgggtcta gaaataaaat ttgagcatat taatggctgc 1200 gagaatatat tggcagactc cctctctaga 1230 //