ID   JF909290; SV 1; linear; genomic DNA; STD; VRL; 482 BP.
XX
AC   JF909290;
XX
DT   01-JUL-2011 (Rel. 109, Created)
DT   05-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE   East African cassava mosaic virus isolate Comoros:Mayotte:YT27B00p:2003
DE   coat protein (AV1) gene, partial cds.
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KW   .
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OS   East African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-482
RX   DOI; 10.1186/1471-2148-12-228.
RX   PUBMED; 23186303.
RA   De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M.,
RA   Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B.,
RA   Harkins G.W., Varsani A., Martin D.P., Lett J.M.;
RT   "East African cassava mosaic-like viruses from Africa to Indian ocean
RT   islands: molecular diversity, evolutionary history and geographical
RT   dissemination of a bipartite begomovirus";
RL   BMC Evol. Biol. 12(1):228-228(2012).
XX
RN   [2]
RP   1-482
RA   Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L.,
RA   Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.;
RT   ;
RL   Submitted (24-MAR-2011) to the INSDC.
RL   UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France
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DR   MD5; f2c283cd5067b3267f2e424cd5666640.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..482
FT                   /organism="East African cassava mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta (cassava)"
FT                   /isolate="Comoros:Mayotte:YT27B00p:2003"
FT                   /mol_type="genomic DNA"
FT                   /country="Mayotte"
FT                   /lat_lon="12.92 S 45.16 E"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:62079"
FT   gene            <1..>482
FT                   /gene="AV1"
FT   CDS             <1..>482
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8UU78"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:F8UU78"
FT                   /protein_id="AEF12265.1"
FT                   /translation="GCEGPCKVQSYEQRDDVKHIGMGRCVSDVTRGSGITHRVGKRFCV
FT                   KSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNEPTTATVK
FT                   NDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYENHTENA"
XX
SQ   Sequence 482 BP; 139 A; 79 C; 133 G; 131 T; 0 other;
     ggctgtgaag gcccatgtaa ggttcagtcg tatgaacaga gggatgatgt taagcacatt        60
     ggtatgggcc gatgtgtcag tgatgttact cgtgggtcag gcattaccca tagagtcggg       120
     aagaggtttt gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatatc       180
     aagaagcaaa atcatacgaa ccatgttatg ttcttcctcg ttcgagacag aaggccttat       240
     ggtccgagcc cgcaagattt tggacaagtg ttcaacatgt ttgataatga acctactact       300
     gcaactgtga agaatgatct gagggaccgg tatcaggtgt tacgtaaatt ctatgcgact       360
     gttgttggtg gaccctccgg gatgaaggaa caagcgctgg ttaagaggtt ttttaggatc       420
     aataatcatg tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat       480
     gc                                                                      482
//