ID   JF909281; SV 1; linear; genomic DNA; STD; VRL; 482 BP.
XX
AC   JF909281;
XX
DT   01-JUL-2011 (Rel. 109, Created)
DT   05-DEC-2012 (Rel. 115, Last updated, Version 3)
XX
DE   East African cassava mosaic virus isolate Seychelles:Mahe:SC11B00p:2004
DE   coat protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   East African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-482
RX   DOI; 10.1186/1471-2148-12-228.
RX   PUBMED; 23186303.
RA   De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M.,
RA   Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B.,
RA   Harkins G.W., Varsani A., Martin D.P., Lett J.M.;
RT   "East African cassava mosaic-like viruses from Africa to Indian ocean
RT   islands: molecular diversity, evolutionary history and geographical
RT   dissemination of a bipartite begomovirus";
RL   BMC Evol. Biol. 12(1):228-228(2012).
XX
RN   [2]
RP   1-482
RA   Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L.,
RA   Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.;
RT   ;
RL   Submitted (24-MAR-2011) to the INSDC.
RL   UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France
XX
DR   MD5; b6fd46af4b31c62e89ef3ca1ce8f8a9d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..482
FT                   /organism="East African cassava mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta (cassava)"
FT                   /isolate="Seychelles:Mahe:SC11B00p:2004"
FT                   /mol_type="genomic DNA"
FT                   /country="Seychelles:Mahe"
FT                   /lat_lon="4.67 S 55.46 E"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:62079"
FT   gene            <1..>482
FT                   /gene="AV1"
FT   CDS             <1..>482
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8UU69"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:F8UU69"
FT                   /protein_id="AEF12256.1"
FT                   /translation="GCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHRVGKRFCV
FT                   KSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMYDNEPTTATVK
FT                   NDLRDRYQVLRKFYATVIGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYENHTENA"
XX
SQ   Sequence 482 BP; 141 A; 79 C; 134 G; 128 T; 0 other;
     ggctgtgaag gcccatgtaa ggttcagtct tatgaacaga gggatgatgt gaagcacact        60
     ggtatggtcc gatgtgtcag tgatgttact cgtgggtcag gcattaccca tagagtcggg       120
     aagaggtttt gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatatc       180
     aagaagcaaa atcatacgaa ccatgttatg ttcttcctcg ttcgagatag aaggccttat       240
     gggccgagcc cgcaagattt cggacaagtg ttcaacatgt atgataatga acctaccacg       300
     gcaactgtga agaatgatct tagggaccgg tatcaggtgt tgcgtaaatt ctatgcgacg       360
     gttattgggg gaccctctgg gatgaaggaa caagcactgg ttaagaggtt ttttaggatt       420
     aataatcatg tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat       480
     gc                                                                      482
//