ID   JF909273; SV 1; linear; genomic DNA; STD; VRL; 482 BP.
XX
AC   JF909273;
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DT   01-JUL-2011 (Rel. 109, Created)
DT   05-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE   East African cassava mosaic Kenya virus isolate
DE   Comoros:Grande-Comore:GC22B00p:2004 coat protein (AV1) gene, partial cds.
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KW   .
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OS   East African cassava mosaic Kenya virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-482
RX   DOI; 10.1186/1471-2148-12-228.
RX   PUBMED; 23186303.
RA   De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M.,
RA   Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B.,
RA   Harkins G.W., Varsani A., Martin D.P., Lett J.M.;
RT   "East African cassava mosaic-like viruses from Africa to Indian ocean
RT   islands: molecular diversity, evolutionary history and geographical
RT   dissemination of a bipartite begomovirus";
RL   BMC Evol. Biol. 12(1):228-228(2012).
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RN   [2]
RP   1-482
RA   Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L.,
RA   Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.;
RT   ;
RL   Submitted (24-MAR-2011) to the INSDC.
RL   UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France
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DR   MD5; 5174ea7c0c53bc970da3a17aede4cb2b.
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FH   Key             Location/Qualifiers
FH
FT   source          1..482
FT                   /organism="East African cassava mosaic Kenya virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta (cassava)"
FT                   /isolate="Comoros:Grande-Comore:GC22B00p:2004"
FT                   /mol_type="genomic DNA"
FT                   /country="Comoros:Grande-Comore"
FT                   /lat_lon="11.37 S 43.35 E"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:393599"
FT   gene            <1..>482
FT                   /gene="AV1"
FT   CDS             <1..>482
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8UU61"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:F8UU61"
FT                   /protein_id="AEF12248.1"
FT                   /translation="GCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHRVGKRFCV
FT                   KSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNEPTTATVK
FT                   NDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYENHTENA"
XX
SQ   Sequence 482 BP; 139 A; 75 C; 129 G; 139 T; 0 other;
     ggctgtgaag gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt taagcacacg        60
     ggtatggttc gatgtgtcag tgatgttact cgtgggtcag gtattactca cagagtcggg       120
     aagaggtttt gtgttaagtc catatatata ttgggcaaga tctggatgga tgagaatatc       180
     aagaagcaaa atcatacgaa ccatgttatg ttcttccttg tgcgagatag aaggccttat       240
     ggtccgagtc ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactact       300
     gcaactgtga agaatgatct tagggaccgg tatcaggtgt tacgtaaatt ctatgcgact       360
     gttgttggtg gaccctctgg gatgaaggaa caagctctgg ttaagaggtt ttttaggatc       420
     aataatcatg tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat       480
     gc                                                                      482
//