ID   JF909268; SV 1; linear; genomic DNA; STD; VRL; 482 BP.
XX
AC   JF909268;
XX
DT   01-JUL-2011 (Rel. 109, Created)
DT   05-DEC-2012 (Rel. 115, Last updated, Version 3)
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DE   East African cassava mosaic virus isolate
DE   Comoros:Grande-Comore:GC16B00p:2004 coat protein (AV1) gene, partial cds.
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KW   .
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OS   East African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-482
RX   DOI; 10.1186/1471-2148-12-228.
RX   PUBMED; 23186303.
RA   De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M.,
RA   Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B.,
RA   Harkins G.W., Varsani A., Martin D.P., Lett J.M.;
RT   "East African cassava mosaic-like viruses from Africa to Indian ocean
RT   islands: molecular diversity, evolutionary history and geographical
RT   dissemination of a bipartite begomovirus";
RL   BMC Evol. Biol. 12(1):228-228(2012).
XX
RN   [2]
RP   1-482
RA   Villemot J., Lefeuvre P., Villar E., Hoareau M., Abdoul-Karime A.L.,
RA   Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., Lett J.-M.;
RT   ;
RL   Submitted (24-MAR-2011) to the INSDC.
RL   UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France
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DR   MD5; e503b4a0086ca7445bd49be770a06453.
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FH   Key             Location/Qualifiers
FH
FT   source          1..482
FT                   /organism="East African cassava mosaic virus"
FT                   /segment="DNA-A"
FT                   /host="Manihot esculenta (cassava)"
FT                   /isolate="Comoros:Grande-Comore:GC16B00p:2004"
FT                   /mol_type="genomic DNA"
FT                   /country="Comoros:Grande-Comore"
FT                   /lat_lon="11.72 S 43.28 E"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:62079"
FT   gene            <1..>482
FT                   /gene="AV1"
FT   CDS             <1..>482
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8UU56"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:F8UU56"
FT                   /protein_id="AEF12243.1"
FT                   /translation="GCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHRVGKRFCV
FT                   KSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGQSPQDFGQVFNMFDNEPTTATVK
FT                   NDLRDRYQVLRKFYTTVVGGPSGMKEQSLVKRFFRINNHVVYNHQEQAKYENHTENA"
XX
SQ   Sequence 482 BP; 143 A; 74 C; 126 G; 139 T; 0 other;
     ggctgtgaag gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt gaagcacact        60
     ggtatggtcc gatgtgttag tgatgttact cgtggatcag gcattaccca tagagtcggg       120
     aagaggtttt gtgtgaagtc catatatata ttgggcaaga tttggatgga tgagaatatc       180
     aagaagcaaa atcatacgaa ccatgttatg ttcttccttg ttcgagatag aaggccttat       240
     ggtcagagtc ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactacg       300
     gcaactgtga agaatgatct tagggaccga tatcaggtgt tacgtaaatt ttatacgact       360
     gttgttggtg gaccctctgg gatgaaggaa caatctctgg ttaagaggtt ttttaggatc       420
     aataatcatg tagtgtataa tcatcaggaa caggccaagt atgagaacca tactgagaat       480
     gc                                                                      482
//