ID JF909081; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC JF909081; XX DT 21-JUN-2012 (Rel. 113, Created) DT 05-DEC-2012 (Rel. 115, Last updated, Version 3) XX DE East African cassava mosaic Kenya virus isolate DE Comoros:Grande-Comore:GC04B19:2005 segment DNA-A, complete sequence. XX KW . XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2799 RX DOI; 10.1186/1471-2148-12-228. RX PUBMED; 23186303. RA De Bruyn A., Villemot J., Lefeuvre P., Villar E., Hoareau M., RA Harimalala M., Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., RA Harkins G.W., Varsani A., Martin D.P., Lett J.M.; RT "East African cassava mosaic-like viruses from Africa to Indian ocean RT islands: molecular diversity, evolutionary history and geographical RT dissemination of a bipartite begomovirus"; RL BMC Evol. Biol. 12(1):228-228(2012). XX RN [2] RP 1-2799 RA Villemot J., Lefeuvre P., Villar E., Hoareau M., Harimalala M., RA Abdoul-Karime A.L., Abdou-Chakour C., Reynaud B., Varsani A., Martin D.P., RA Lett J.-M.; RT ; RL Submitted (24-MAR-2011) to the INSDC. RL UMR PVBMT, CIRAD, 7, chemin de l'IRAT, Saint-Pierre, Reunion 97410, France XX DR MD5; 020145707a39e37c42dd3535061ac1da. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA-A" FT /host="Manihot esculenta (cassava)" FT /isolate="Comoros:Grande-Comore:GC04B19:2005" FT /mol_type="genomic DNA" FT /country="Comoros:Grande-Comore" FT /lat_lon="11.72 S 43.27 E" FT /collection_date="2005" FT /db_xref="taxon:393599" FT gene 175..531 FT /gene="AV2" FT CDS 175..531 FT /codon_start=1 FT /gene="AV2" FT /product="movement protein" FT /db_xref="GOA:I6LXA7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I6LXA7" FT /protein_id="AEG89820.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCS" FT gene 335..1108 FT /gene="AV1" FT CDS 335..1108 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:I6LXB2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LXB2" FT /protein_id="AEG89819.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRNKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGMTHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGQSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYTTVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1105..1509) FT /gene="AC3" FT CDS complement(1105..1509) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:I6LXB6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LXB6" FT /protein_id="AEG89823.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFDITNHDRRPGNMNHDI FT ITFQIRFNHNIRKALGIHKCFLNFKVWTTLRPPTGLFLKVFRYQVLKYLDMIGVISINT FT VIQAVDHVMYNVLLNTLQVTEQHAIKFNLY" FT gene complement(1250..1657) FT /gene="AC2" FT CDS complement(1250..1657) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:I6LYF5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LYF5" FT /protein_id="AEG89822.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRHHQPRQETREHEPRHHHIPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT gene complement(1581..2645) FT /gene="AC1" FT CDS complement(1581..2645) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:I6LXD8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LXD8" FT /protein_id="AEG89821.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQLRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVKSYL FT DKDGDTIQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLERIFQEPLTPYISPFLSSSFTNVPEELEAWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKHQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSED" FT gene complement(2291..2494) FT /gene="AC4" FT CDS complement(2291..2494) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6LXB7" FT /protein_id="AEG89824.1" FT /translation="MKMGNLICMPSFSSRASTIVPTNDSSTSYPLPGQPISTQIFRELN FT QAPTSSPIWIRTETPSNGASFR" XX SQ Sequence 2799 BP; 728 A; 559 C; 721 G; 791 T; 0 other; accggatggc cgcgcccgaa aaaagcaggt ggaccccaca agatggccgc gcccgttaaa 60 gaaagtggtc cccgcgcact tgtgttggtc ggccagtcat attcacgcgt gaaagtctag 120 atatttgttg tttgtcttta tagacttcgt cgcgaagtag tggagcgcgt caacatgtgg 180 gatccattgt tgaacgattt tcccgaaacc gttcacggtt tccgttctat gcttgctgtt 240 aaatacctgt tacatctgga acaggaatac gatcgcggta ctgtcggggc ggagtatata 300 cgtgatttaa taggggttct acggtgtaag agttatgtcg aagcgaccag gagatataat 360 aatctcaaca cccgtatcca aggtgcggag gaggctgaac ttcgacagcc catacacgaa 420 ccgtgttgtt gcccccactg tccgcgtcac cagaaacaaa atatgggcca acaggcccat 480 gtatcggaag cccaagatgt acagaatgta tcgaagccca gatgttccta agggctgtga 540 aggcccatgt aaggttcagt cctatgaaca gagggatgat gtgaagcaca ctggtatggt 600 ccgatgtgtc agtgatgtta ctcgtggatc aggcatgacc catagagtcg ggaagaggtt 660 ttgtgtgaag tccatatata tattgggcaa gatttggatg gatgagaata tcaagaagca 720 aaatcatacg aaccatgtta tgttcttcct tgttcgagat agaaggcctt atggtcagag 780 tcctcaagat tttggacaag tgttcaacat gtttgataat gaacctacta cggcaactgt 840 gaagaatgat cttagggacc gatatcaggt gttacgtaaa ttctatacga ctgttgtggg 900 tggaccctct gggatgaagg aacaagctct ggttaagagg ttctttagga tcaataatca 960 tgtagtgtat aatcaccagg aacaggccaa gtatgagaat catactgaga atgcgttgtt 1020 attgtatatg gcatgtacac atgcctcgaa tcctgtgtac gctacgctga aaatacgcat 1080 ctatttctat gatgcagtga caaattaata aaggttgaat tttattgcat gttgctccgt 1140 aacttggagt gtgttgagta atacattgta cataacatga tcaacagctt gaattacagt 1200 gttaatggaa ataacgccta tcatatctaa atacttgagc acttgatatc taaatacttt 1260 taagaaaaga ccagtcggag gccgtaaggt cgtccagacc ttgaagttga gaaaacactt 1320 gtgaatcccc aatgccttcc ggatgttgtg gttgaaccgt atctggaatg tgatgatgtc 1380 gtggttcatg ttccctggtc tcctgtcgtg gttggtgatg tcgaaataga ggggatttgt 1440 tatttcccag gtaaaaacgc cattctttgc ttgaggcgca gtgatgagtt cccctgtgcg 1500 agaatccatg attgatgcag tcgatatgga gatagaacga gcagccgcat tcgaggtcta 1560 cccgcctacg tctgacggcc ctagtcttcg ctgtgcggtg ttggactttg atgggcactt 1620 gagaacaatg gctcgtggag ggtgatgaag gtggcattct ttaaagccca ggctttaagg 1680 gattggtgct tttcctcgtc cagaaactct ttatatgatg atgttggtcc tggattgcat 1740 aggaagatag tgggaatgcc gcctttaatt tgaattggct tcccgtactt tgtattgctt 1800 tgccagtccc tttgggcccc catgaattct ttgaaatgct tgaggtagtg ggggtcgacg 1860 tcatcaatga cgttgtacca tgcgtcgttg ctgtatacct ttggactgag atccaggtgt 1920 ccacacaagt agttatgtgg tcccaaagag cgagcccaca ttgtcttccc tgtcctacta 1980 tctccctcga tgacgatact actaggtctc catggccgcg cagcggaacc catcacgttc 2040 tcggaaaccc aagcttcaag ttcctcagga acgttagtga aagaagaaga aagaaaggga 2100 gaaatataag gagtgagagg ctcttgaaaa atcctctcta aattgctatt taaattatga 2160 aactgtaaaa caaaatcttt tggggctagt tcccgtatta cattaagagc ctctgactta 2220 tttgctgagt taagagcctt tgcgtaagcg tcattggcgg attgttgtcc gcctcgagca 2280 gatcgtccgt ctatctgaaa ctcgccccat tggatggtgt ctccgtcctt atccagatag 2340 gacttgacgt cggagcttga tttagctccc tgaatatttg ggtggaaatg ggctgaccgg 2400 gaaggggata tgaggtcgaa gaatcgttgg ttggtacaat tgtacttgcc ctcgaactga 2460 atgagggcat gcagatgagg ttccccattt tcatggagtt ctctgcagat cttgatgaac 2520 aatttatttg ttggggtttg gagttgtcgg agctgatcca aggcctcttc tttcgataga 2580 gaacatttgg gatatgtgag aaaatagttt ttggctttga tgctaaaacg accagccctt 2640 ggcatttgcg ctgtcgtata gcaatcgggg ggcactcaaa gtctgtagca atcgggggaa 2700 tgggggggca atttatatga tgccccccaa atggcattta tgtaatatcc tcatgaaatt 2760 tgaatttcaa acgtggaaag cggccatccg tataatatt 2799 //