ID   JF798576; SV 1; linear; genomic DNA; STD; VRL; 2027 BP.
XX
AC   JF798576;
XX
DT   31-JUL-2011 (Rel. 109, Created)
DT   31-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cotton leaf curl Burewala virus isolate cotton-Lucknow coat protein (AV1),
DE   AC3 protein (AC3), and transcription activator protein (AC2) genes,
DE   complete cds.
XX
KW   .
XX
OS   Cotton leaf curl Burewala virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-2027
RA   Kumar A., Snehi S.K., Raj S.K.;
RT   "Cotton leaf curl virus from Lucknow, India";
RL   Unpublished.
XX
RN   [2]
RP   1-2027
RA   Kumar A., Snehi S.K., Raj S.K.;
RT   ;
RL   Submitted (18-MAR-2011) to the INSDC.
RL   Plant Molecular Virology, National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U. P. 226001, India
XX
DR   MD5; 1a04c8415904d83d9aa0b336eb1708f4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2027
FT                   /organism="Cotton leaf curl Burewala virus"
FT                   /host="cotton"
FT                   /isolate="cotton-Lucknow"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf tissue"
FT                   /collection_date="Aug-2010"
FT                   /db_xref="taxon:620894"
FT   gene            1..771
FT                   /gene="AV1"
FT   CDS             1..771
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="encapsidation"
FT                   /db_xref="GOA:G1CDF3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:G1CDF3"
FT                   /protein_id="AEK86509.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRIYRMYRSPDVPRGCEVPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   gene            complement(768..1172)
FT                   /gene="AC3"
FT   CDS             complement(768..1172)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="AC3 protein"
FT                   /db_xref="GOA:G1CDF4"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:G1CDF4"
FT                   /protein_id="AEK86510.1"
FT                   /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI
FT                   LTIRIQFNHNLRKALGIHKCFIAFRIWMTSHPPTGRFLRVFRTQVLKYLNNLGIVSINN
FT                   VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY"
FT   gene            complement(913..1317)
FT                   /gene="AC2"
FT   CDS             complement(913..1317)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcription activator protein"
FT                   /db_xref="GOA:E3ULZ4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:E3ULZ4"
FT                   /protein_id="AEK86511.1"
FT                   /translation="MQSSSLSKDHCTQLPIKVQHREAKRRNRRRRVDLECGCSYYLSIN
FT                   CHNHGFTHRGTHHCSSSREWRIYLGSSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQSQP
FT                   EESVGDTQMFHSFPNLDDLTPSDWSFLKGL"
XX
SQ   Sequence 2027 BP; 527 A; 415 C; 474 G; 611 T; 0 other;
     atgtcgaagc gaccagcaga tataatcatt tccacgcccg cttcgaaggt acgccgccgt        60
     ctcaacttcg acagcccata tgtgagccgt gctgctgccc ccattgtccg cgtcaccaaa       120
     gcaaaagcat gggcgaacag gcccatgaac agaaagccca ggatatatag gatgtacaga       180
     agtccagatg ttcctagagg atgtgaagtt ccatgtaagg ttcagtcgtt tgagtccaga       240
     catgatattc agcatatagg taaagtaatg tgtgttagtg atgttactcg tggtactggg       300
     ctgacccata gagttggtaa gagattttgt gttaagtctg tttatgtgtt gggtaagatc       360
     tggatggatg agaacattaa gacgaagaat cacacgaata gtgtgatgtt tttcttggtt       420
     agagatcgta gacctgttga taaacctcaa gattttggag aggtatttaa tatgtttgat       480
     aatgagccca gtacggcgac tgtgaagaat gttcatcgtg ataggtatca agttctgcgc       540
     aaatggtatg caactgtcac cggtggacaa tacgcttcaa aggaacaagc tctcgtgaag       600
     aaatttatta gagttaataa ttatgttgtg tataaccagc aggaagctgg caagtatgag       660
     aatcattctg agaatgcttt aatgttgtat atggcgtgta ctcacgcctc taacccagtg       720
     tatgctacct tgaagatacg gatctacttc tatgattccg tgacaaatta ataaatattg       780
     aattttattg aagatgattg gtctacaaat acaacatgtt gtaatacatt ccataataca       840
     tgatcaactg ctctaactac attattaata ctgacaattc ctaagttatt taaatatttt       900
     agcacttgag tcctaaagac ccttaagaaa cgaccagtcg gagggtgtga ggtcatccag       960
     attcggaaag ctatgaaaca tttgtgtatc cccaacgctt tcctcaggtt gtgattgaac      1020
     tggatcctga tcgtgagtat atccatattc gtcgtgaatg gacggttgac gtggctgatg      1080
     atcttgaaat agaggggatt tggaacttcc cagatatatg cgccattccc tgcttgagct      1140
     gcagtgatgg gttcccctgt gcgtgaatcc atggttgtgg cagttgattg acagataata      1200
     agaacacccg cattcaagat ctactctcct cctcctgttg cgtctcttcg cttccctgtg      1260
     ctgtactttg attggaagct gagtacagtg gtccttcgag agtgatgaag attgcatttt      1320
     ttaaggccca attctttaat gctgtgtttt tttcctcgtt gaggaattcc ttataactgc      1380
     tgttcggacc aggattgcac aggaagattg tcggtatccc gcctttaatt tgaactggct      1440
     ttccgtattt tgtgttggac tgccagtctc tttgggcccc catgaactct ttaaagtgtt      1500
     tgaggaaatg cgggtcgacg tcatcaatga cgttgtacca ggcgtcgtga ctgtatactt      1560
     tgttactcag gtccagatgt ccgcacaaat agttatgtgg tccctaagat ctagcccaaa      1620
     tcgacttccc cgttcgacta tctccctcaa ttactatact cctaggtcta aggggcggcg      1680
     cagcggcgtc gacatcgtta tcaaggtccc agacttgaag ttctaatgaa ccttgatgga      1740
     aggaggatgg agatcaagga gaaatatagg gagccggtgg ctcctgaaag attctgtcta      1800
     gatttgcatt taaattatga aattgtagta caaaatcttt aggagctagt tccttaatga      1860
     ctctaagagc ctctgactta ctgcctgcat taagtgctgc ggcgtaagcg tcgttggctg      1920
     tctgctgtcc tcctcttgct gatcttccat ctatctgaaa ctctccccac tcgagagtgt      1980
     ccccgtcctt gtcgatgtag gccttgacat ctgagcgtga ctcattg                    2027
//