ID HQ896203; SV 1; circular; genomic DNA; STD; VRL; 2609 BP. XX AC HQ896203; XX DT 26-APR-2011 (Rel. 108, Created) DT 24-FEB-2012 (Rel. 111, Last updated, Version 3) XX DE Sida golden yellow vein virus-Malvastrum [CU:Camaguey 177:09] segment DE DNA-A, complete sequence. XX KW . XX OS Sida golden yellow vein virus-Malvastrum [CU:Camaguey 177:09] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RX DOI; 10.1007/s00705-011-1123-8. RX PUBMED; 21964921. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Begomoviruses infecting weeds in Cuba: increased host range and a novel RT virus infecting Sida rhombifolia"; RL Arch. Virol. 157(1):141-146(2012). XX RN [2] RP 1-2609 RA Fiallo-Olive E., Martinez-Zubiaur Y., Moriones E., Navas-Castillo J.; RT ; RL Submitted (17-JAN-2011) to the INSDC. RL Departamento de Proteccion de Plantas, Centro Nacional de Sanidad RL Agropecuaria, Carretera de Tapaste y Autopista Nacional, San Jose de las RL Lajas, La Habana 32700, Cuba XX DR MD5; a28540750e4515f45d86d47325506602. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Sida golden yellow vein virus-Malvastrum FT [CU:Camaguey 177:09]" FT /segment="DNA-A" FT /host="Malvastrum coromandelianum" FT /isolate="177" FT /mol_type="genomic DNA" FT /country="Cuba" FT /collected_by="E. Fiallo-Olive" FT /collection_date="May-2009" FT /clone="177E" FT /db_xref="taxon:1003172" FT gene 184..939 FT /gene="AV1" FT CDS 184..939 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:F5BH40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F5BH40" FT /protein_id="AEC03072.1" FT /translation="MTKRDSSWRSIAGTSKVRRTLNFSPRGGGGPKQTRASEWVNRPMY FT RKPLIYRTLKTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATI FT KNDLRDRYQVMHRFYGKVTGGQYASNEQALVRRFWKINNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(936..1334) FT /gene="AC3" FT CDS complement(936..1334) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:F5BH41" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F5BH41" FT /protein_id="AEC03073.1" FT /translation="MDSRTGELITARQAENGVYTWEIENPLYFKIDRVEELLFTRTRVY FT HIQIRFNHNLRKALGLHKAYLNFQVWTTSMTASGLTYLLRFRQLVNMYLDQLGVIGINN FT VIRAVRFATDNAHVRYVLEQHEIKFKFY" FT gene complement(1081..1470) FT /gene="AC2" FT CDS complement(1081..1470) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:F5BH42" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F5BH42" FT /protein_id="AEC03074.1" FT /translation="MLSSSPSQPPCIKKAHRQAKRRAIRRRRIDLECGCSIYFHIGCTG FT HGFTHRGTHHCTSGREWRIYLGNRKSPVFQDRQSRGTAVHQDQSVPHPDTIQPQPEESV FT GSPQSLPELPSLDDIDDSFWVNLFT" FT gene complement(1382..2467) FT /gene="AC1" FT CDS complement(1382..2467) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:F5BH43" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F5BH43" FT /protein_id="AEC03075.1" FT /translation="MPSIKRFKINAKNYFITYPDCSLNKEEALSQLLNLSTPVNKKFIK FT ICRELHQNGKPHLHVLMQFEGKYACKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT AKDGDTLEWGEFQIDGRSARGGCQSANDSYAKALNADSVDSAMAVLKEEQPKDFVLQNH FT NIRSNLERIFAKAPEPWTPPFPLSSFTAVPDEMQAWVDGYFGTDPAARPERPVSIIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNSRVFSNQVEYNVIDDVAPHYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENSALRNWTNKNVIFITLT FT APLYQKGTQASQKEGNQETQD" FT gene complement(2053..2310) FT /gene="AC4" FT CDS complement(2053..2310) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F5BH44" FT /protein_id="AEC03076.1" FT /translation="MGSLISMCSCNSRENMHARITDSSTWYPQPGQHISIQTYRELNPA FT PTSSPTSQRTEIRWNGENSRSTAEVLEEAANLLMIHMPRR" XX SQ Sequence 2609 BP; 631 A; 592 C; 608 G; 778 T; 0 other; accggatggc cgcgcgattt tttgcccttt tgcttttcac gcgcgccccg cttttctcac 60 tcgcgctatc gtccaatcat attgcgcctg ccgcgcttaa ttatttcaaa caacttgggc 120 tctaagttgt tgttgggcct atttatgaag cgattggatt tgggccatac aatttaattc 180 aaaatgacta agcgcgattc gtcttggcgc tctattgctg gaacctcaaa ggttcgtcgc 240 acgttgaatt tctccccacg tggaggtggt ggcccaaaac agacacgggc ctctgaatgg 300 gttaacaggc ctatgtacag gaagcccttg atctaccgga ctttaaagac gcccgatgtt 360 ccaagaggtt gtgaaggccc gtgcaaggtc cagtcctatg aacagcgtca tgatatctcc 420 cacgtcggca aggtgatgtg tatttctgat gtcactcgtg gtaatggcat tacccaccgt 480 gtgggtaagc gtttttgtgt taagtctgtg tacattttag ggaagatatg gatggatgag 540 aacatcaaac tgaagaacca cacgaacagt gtcatgttct ggttggtcag ggaccgtcga 600 ccctatggca ctccaatgga ctttggccaa gtgttcaata tgtatgacaa cgagcctagc 660 actgctacga ttaagaacga tctcagggat cgttaccagg ttatgcacag gttctatggc 720 aaagtcactg gtggacaata tgccagcaac gagcaagctt tggtcaggcg attttggaag 780 atcaacaacc atgtggtcta caaccaccaa gaggctggca agtacgagaa tcacactgag 840 aacgctctgt tattgtacat ggcatgtact catgcctcta accctgtgta tgctacattg 900 aaaattcgaa tctattttta cgattcgata acgaattaat aaaatttaaa ttttatttca 960 tgctgttcaa gtacatatct tacatgcgca ttgtctgttg caaatcgaac agctctgatt 1020 acattgttaa tcccaattac acctaattgg tctaagtaca tattgactaa ctgtctaaac 1080 ctaagtaaat aagttaaccc agaagctgtc atcgatgtcg tccagacttg gaagttcagg 1140 taggctttgt ggagacccaa cgctttcctc aggttgtggt tgaatcgtat ctggatgtgg 1200 tacactctgg tcctggtgaa cagcagttcc tctactctgt ctatcttgaa atacagggga 1260 ttttctattt cccaggtata tacgccattc tctgcctgac gtgcagtgat gagttcccct 1320 gtgcgtgaat ccatgtcctg tgcagccgat gtggaagtaa atggagcacc cgcactctag 1380 atcaatcctg cgtctcctga ttgccctcct tttggcttgc ctgtgtgcct ttttgataca 1440 agggggctgt gagggtgatg aagataacat tcttatttgt ccagttcctg agagctgagt 1500 tttcctcttt gtccaggaaa tctttatagc tggcaccctc accaggattg caaagcacga 1560 ttgatgggat cccgccttta atttgaactg gcttgccgta tttgcaattt gactgccagt 1620 ctttctgggc ccccaacagt tctttccagt gctttagctt tagatagtgc ggtgcgacgt 1680 catcgatgac gttatattcc acttggttgg aaaagactct tgagttgaag tccaggtgtc 1740 cactgaggta attatgtggg cctaacgcac gagcccacat cgtcttccct gtcctcgagt 1800 caccttcgac tatgatactc actggtcttt ccggccgcgc agcgggatcc gttccaaaat 1860 aaccgtctac ccatgcttgc atctcgtcag gaacggctgt gaaagaggag aggggaaacg 1920 gaggagtcca tggttccgga gccttagcga atatcctttc taagttggaa cggatgttat 1980 gattctgcaa aacgaaatct tttggctgtt cttctttcaa aaccgccatg gcagaatcaa 2040 cagaatctgc gtttaacgcc ttggcatatg aatcattagc agattggcag cctcctctag 2100 cacttctgcc gtcgatctgg aattctcccc attccagcgt atctccgtcc tttgcgatgt 2160 aggacttgac gtcggagctg gatttagctc cctgtatgtt tggatggaaa tgtgctgacc 2220 tggttgggga taccaagtcg aagaatctgt tattcttgca tgcatatttt ccctcgaatt 2280 gcatgagcac atggagatga ggcttcccat tctgatggag ctctctgcaa attttgatga 2340 acttcttgtt cactggcgtg gaaagattta gtaattggga aagtgcctct tctttgttta 2400 aagagcagtc tggataagtg ataaaatagt ttttggcatt tattttaaaa cgtttaatcg 2460 atggcatttt tgtaataata agggggtcac cgattgaggc tctctcaaac ttgctctagc 2520 aattggggaa cggggtctca tttatactag aaccctcaat agaagtttca atctcgttca 2580 cacacgtggc ggccatccgc tataatatt 2609 //