ID HQ834962; SV 1; linear; genomic RNA; STD; VRL; 3816 BP. XX AC HQ834962; XX DT 18-JUL-2011 (Rel. 109, Created) DT 18-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Arabis mosaic virus isolate DU13 segment RNA2 polyprotein P2 gene, complete DE cds. XX KW . XX OS Arabis mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3816 RA Lopez-Fabuel I., Bertolini E., Yuste A., Legorburu F.J., Olmos A.; RT ; RL Submitted (29-DEC-2010) to the INSDC. RL Proteccion Vegetal y Biotecnologia, Instituto Valenciano de Investigaciones RL Agrarias, Ctra Moncada Naquera km 4, 5, Moncada, Valencia 46113, Spain XX DR MD5; 863c0bcc14384dd56fa67bceb47fe03e. XX FH Key Location/Qualifiers FH FT source 1..3816 FT /organism="Arabis mosaic virus" FT /segment="RNA2" FT /host="grapevine cultivar Tempranillo" FT /isolate="DU13" FT /mol_type="genomic RNA" FT /country="Spain" FT /collection_date="2008" FT /db_xref="taxon:12271" FT CDS 292..3624 FT /codon_start=1 FT /product="polyprotein P2" FT /db_xref="GOA:G0YW79" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:G0YW79" FT /protein_id="AEK20744.1" FT /translation="MGKFYYSNRRLACWAAGKSPDVRGSIEQWLAAITTDSSFRQTVKE FT DVQANRSEPTAIRMFSWKVGTGPIDNPEMCNWHYVLTGEEPAQPTEPVKAQEVVVPPVK FT VIPSPPPMPRPHFRPIGAFAPTRSGYIRATVERLSQEREESRAAALFAELPLEYPQGAP FT LVVPRGFAAMRWTYHTTWRRWYDTSDERALRVHPGGPALPPPPPPPPIQKPPSFEERLR FT AALERQSCARAFALETSLGLNVAWVGMATIPSTSICCADGRTTGGQTIAQEADPINHRV FT ASNTAPGRATWISERRNALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPL FT LPPLRNAYAPRGLWRGPSTRANFTLDFRLNGIPTGQNTLEILYNPVADEEMEEYRDRGM FT SAVVIDALEIAINPFGMPGNPTDLTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFP FT GLQYSQEEPRRNSIIRLYVASTNATVDTDSILAAISVGTLRQHIGSLHNRTVASSVHAA FT QVQGTTLRATMMGNSVVVSPEGSLVAGTPEANVQIGGGSSMRMVGPLAWENVEEPGQTF FT TIRSRSRSMRVDRNADVGVALPRMSTTTRGLAGRGSVQVPKDCQAGRYLKTLDLRDMVS FT EFSGIQYEKWITAGLIMPEFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTANPVYT FT LSVPHWLLHHKNGTTSCDIDYGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEF FT VVELYAEFEAAKTFLGRPNFVYSAGAFSGSFNFLTVPPLEYDLSTTSAYKSVSLLLGQT FT LTDGTHKVYNYNNTLLSFFLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLF FT KYPGCYVDEDGNFEIEIRSPYHRTPLRLLNAQAASSFTSSLNFYAISGPIAPSGETARM FT SVVVQINEIALPDLSVPSFPDDYFLWVDFSAFTVDAEEYVIGSRFFDITSTTSTVHLGD FT NPFAHMIACHGLHHGILDLKLMWDLEGEFGKSSGGVTITKLCGDKTTGMDGASRVCALQ FT NMGCETELYIGNFAGANPNTALSLYSRWLAIKLDKARSMKMLRILCKPRGNFEFYGRTC FT FRV" XX SQ Sequence 3816 BP; 917 A; 820 C; 933 G; 1146 T; 0 other; atgaaaaatt ctgtggagtt ttcatataaa cgcaatccac agttctttca gcgaagagtt 60 taagaaactc accagtgttt gaaatcaatc cgttaagagc ggagcaaaaa tcaaaccgtt 120 aagagcggtg tcatagcgaa gagtttaaga aactcagtag ccatagcttc ctctcacccc 180 ctataccaag tgctttattt atttagtttg atagttgggg ttttgatagg tggccttgct 240 ggcctttctt atcttttgtt tcattttgtt tttcgttttt tacctgcccg tatgggcaag 300 ttttattatt ccaacaggcg tcttgcctgt tgggctgctg gaaagagtcc cgatgttagg 360 ggctctattg aacaatggct ggcggccatt actaccgatt cctccttccg ccaaactgtt 420 aaggaggatg tccaggcaaa ccggagtgag ccaacggcca tccggatgtt ttcctggaaa 480 gtgggaactg ggcccattga caacccagaa atgtgcaatt ggcactacgt cctcacgggc 540 gaagagccag cacagccgac cgagccggtt aaagctcaag aggtggtggt gccacctgtg 600 aaggtcattc cttcaccgcc ccctatgcca aggcctcatt ttaggccaat aggggctttt 660 gcaccaaccc ggtccgggta tatacgggcc actgtggaaa ggctctccca agagcgggaa 720 gagtcgagag ctgcggcact ctttgccgag ttgcctttgg agtaccctca gggtgctcct 780 ttagtagtcc cccgtggttt tgccgccatg aggtggactt atcataccac ctggaggcgg 840 tggtatgaca ctagtgacga gcgcgctctg cgcgtccatc ctggtggtcc tgctttacct 900 cctcctcccc cccctccccc aatccaaaaa ccaccctctt ttgaggagag attgcgagct 960 gcccttgaaa ggcagtcttg tgccagggct ttcgccttgg aaacttcgtt gggccttaac 1020 gtggcctggg taggaatggc taccatccct agcacttcta tatgttgtgc cgatggtagg 1080 actaccggtg ggcagacaat agctcaagaa gccgacccta ttaaccatag agttgcttct 1140 aatacagctc ccggtagggc tacatggatc tcggagcgcc gtaatgctct gagaaggaga 1200 gagcaggcca atagcctgca aggccttgct gctcagactg atatgacgtt tgagcaagct 1260 agaaatgctt atcttggcgc tgctgatatg attgagcaag gtctgccttt gttgcctccc 1320 ttgagaaatg cttatgcacc tcgtggtcta tggagaggac cctctaccag agctaacttc 1380 actctggatt ttaggctcaa tggtattcct actgggcaaa atactttgga aattttatat 1440 aacccagtag cagatgagga aatggaagaa tatcgtgaca ggggtatgtc agcagtcgtg 1500 attgacgcac ttgagattgc catcaatccc tttgggatgc ctggaaatcc gactgatctt 1560 actgtcgtgg caacatatgg gcatgagcgt aatatggaac gtgcctttat tggctcttcg 1620 tcaacctttc ttggtaatgg tttggccaga gccattttct tcccaggttt gcaatatagc 1680 caggaagaac ctaggcgcaa ttctattatt cgcctgtatg ttgcttctac taatgccact 1740 gttgatactg attctatatt agcggccatt agtgttggca ctctacgtca gcatattggc 1800 tcgctccaca atagaacagt ggctagctca gtacacgctg cacaagtaca aggcaccact 1860 ttgagggcca ctatgatggg taattctgtt gtggtttcac ccgaaggaag tcttgtagct 1920 ggaactccag aagctaatgt tcaaattgga ggtggttcca gcatgcgaat ggttgggccc 1980 ttggcctggg aaaatgttga agaaccagga caaaccttta ccataagaag ccgctcccgg 2040 tctatgagag tagatcggaa tgctgatgtt ggagttgccc ttcctcggat gagtactaca 2100 acgcggggac ttgctgggag aggttctgtt caggtaccta aagattgcca ggcagggagg 2160 tacttgaaaa ctcttgactt gagagatatg gttagtgagt tttcaggcat ccagtatgag 2220 aagtggatca ctgccggtct cattatgcca gaatttaaag ttgtgattcg ctatccagcc 2280 aacgctttta cgggtattac gtgggttatg agttttgatg cttataatcg aattacgagc 2340 agtatctcta ccactgctaa tcccgtgtac accctttcgg ttccacattg gctgttacat 2400 cataagaatg gaaccacttc gtgcgatatt gattatgggg agctttgtgg tcatgcgatg 2460 tggtttagtg ccaccacttt tgaaagcccc aaacttcatt tcacatgcct cactgggaat 2520 aataaagaac ttgctgcaga ttgggagttt gtagtggagc tatatgctga gtttgaggca 2580 gcaaaaacat ttcttgggag acccaatttt gtctatagtg ctggagcttt cagtgggtct 2640 ttcaattttc tcactgttcc ccctctggag tatgacctta gtactaccag tgcttataag 2700 agtgtttcct tgcttctggg tcaaactctt actgatggaa ctcataaggt gtataattat 2760 aataacacat tgttgagttt ctttcttggc attggaggcg tagtcaaggg cagagtgcac 2820 atatgtagcc cttgtactta tggcatagtc ctaagagttg ttagtgaatg gaacggggtc 2880 actaacaact ggaatcaatt gtttaaatac cccgggtgtt atgtcgatga agacgggaac 2940 tttgaaatcg aaattcgttc tccctatcat cgaactccat tgcgtttatt aaatgcacaa 3000 gcagctagct cgtttacgag ctctctgaat ttttatgcaa tttcggggcc aattgcccca 3060 agtggagaga cagccaggat gtcagtggta gtgcaaatta atgaaattgc actcccagac 3120 ctttccgttc cttctttccc tgatgattat ttcctttggg tggatttttc agcatttact 3180 gttgatgctg aggaatatgt gatagggtct aggttttttg acattacctc gactactagt 3240 actgtccatc ttggagataa tccttttgcc cacatgatag cttgtcatgg actccaccat 3300 ggtattcttg acctcaagtt aatgtgggat ttggaaggtg agtttgggaa gagttctggt 3360 ggtgttacca tcacgaagtt gtgtggtgat aagactactg gtatggatgg tgcatctcgt 3420 gtttgtgcgt tgcaaaatat gggatgtgaa actgagctat atataggtaa ttttgctggt 3480 gctaatccta acacagcatt atctctatat agccgatggc tcgctatcaa attggataaa 3540 gccaggagta tgaaaatgct ccgaattttg tgcaaaccga gagggaactt tgaattttat 3600 ggcagaacat gtttcagagt ttgagctctc cagcgtcttg ggaatctgac gttaaaagac 3660 ccattatgta ttatgtttat tttaagcttg tttactgctt ttgtgtgttt tatttcatac 3720 ttttagtggc gacaatgtgt tgtttgtcct ttggacacat ttgccttgtt ggactcaaaa 3780 agatttcttt ttctttttaa tgcttttata ttctat 3816 //