ID   HQ681941; SV 1; linear; genomic RNA; STD; VRL; 755 BP.
XX
AC   HQ681941;
XX
DT   22-NOV-2012 (Rel. 114, Created)
DT   22-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Garlic virus D isolate Ec21 capsid protein (CP) and nucleic acid binding
DE   protein (NABP) genes, partial cds.
XX
KW   .
XX
OS   Garlic virus D
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Allexivirus.
XX
RN   [1]
RP   1-755
RA   Baghalian K., Natsuaki K.T.;
RT   "Molecular variability and genetic structure of the population of
RT   Allexivirus infecting garlic in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-755
RA   Baghalian K., Natsuaki K.T.;
RT   ;
RL   Submitted (06-DEC-2010) to the INSDC.
RL   International Agricultural Development, Tokyo University of Agriculture,
RL   Setagay-ku, Tokyo, Tokyo 156-8502, Japan
XX
DR   MD5; d345416bf7f8dfdfd33dfdebb5cbbb94.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..755
FT                   /organism="Garlic virus D"
FT                   /host="Allium sativum (garlic)"
FT                   /isolate="Ec21"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:12430"
FT   gene            <1..444
FT                   /gene="CP"
FT   CDS             <1..444
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /note="ORF5"
FT                   /db_xref="GOA:K7NDX5"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:K7NDX5"
FT                   /protein_id="AET87012.1"
FT                   /translation="WACYHNGSSRFVTLSTKAPCGMPHSELKDLVENFCTLRQFCGFYA
FT                   KACYVTGKQQKKPPASWSRKGYQDDAKFASFDFFNAVLSDFSPAPPGGMRFKPTDAEIL
FT                   AHSMNAKMSIVESRRASNMVSTRADLLAQQQIHEQPKPPMITF"
FT   gene            444..>755
FT                   /gene="NABP"
FT   CDS             444..>755
FT                   /codon_start=1
FT                   /gene="NABP"
FT                   /product="nucleic acid binding protein"
FT                   /note="ORF6"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:K7NG40"
FT                   /protein_id="AET87013.1"
FT                   /translation="MHPHDFNLLCCLHFTKPTLSEDLKRLLFSRCVNDCKLFRKINQNK
FT                   PFQGSSKFAMRRRAKRYNRCFDCGASLVDEHSCKVFTSRAQSDVLAVIREGPAKLYAER
FT                   "
XX
SQ   Sequence 755 BP; 205 A; 199 C; 163 G; 188 T; 0 other;
     tgggcgtgct accacaacgg ttcatcgcgt ttcgtcaccc tgagcacgaa agcaccatgc        60
     ggtatgcccc actctgagct taaagacttg gttgaaaatt tttgcacttt gcggcaattc       120
     tgtggattct acgccaaggc ttgctacgtc acgggcaaac aacagaagaa accgccggca       180
     agctggtcac ggaaaggcta tcaagacgac gcaaaattcg ccagcttcga cttcttcaat       240
     gccgtactta gcgacttctc ccctgcaccg cctggtggaa tgagattcaa acccactgac       300
     gctgagatac ttgcccattc tatgaatgcc aaaatgtcaa tagtggagtc tcgacgggcc       360
     agcaatatgg tttccactcg tgccgacctt ctcgcacaac aacagataca tgagcaaccc       420
     aaaccaccga tgattacgtt ttaatgcatc cacacgactt taacttactc tgctgcctgc       480
     atttcacaaa gcccaccctc tctgaagacc tcaaacgact tctcttttcc cgatgtgtta       540
     atgattgtaa attatttcgt aagattaacc agaataagcc attccaaggc agctcaaagt       600
     ttgctatgcg ccgaagggca aagcgttata accgatgctt cgactgcggt gcttcgttag       660
     tagatgagca tagttgtaaa gtatttacgt caagagctca atcagatgtg ctagctgtca       720
     tacgtgaggg acccgctaag ctatatgctg aaagg                                  755
//