ID HQ393465; SV 1; circular; genomic DNA; STD; VRL; 2829 BP. XX AC HQ393465; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:MP2:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2829 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2829 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; 321516f7011120663b90810fe47d0d97. XX FH Key Location/Qualifiers FH FT source 1..2829 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:MP2:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Rio Grande do Sul" FT /lat_lon="30.2 S 51.29 W" FT /collected_by="Leonardo Cunha de Albuquerque" FT /collection_date="2009" FT /clone="RS9Sac26" FT /db_xref="taxon:100755" FT CDS 99..470 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J7EL42" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J7EL42" FT /protein_id="ADZ96609.1" FT /translation="MLFQSWSPSMADLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 295..1059 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J7EPK6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J7EPK6" FT /protein_id="ADZ96610.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1075..1509) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J7EMY8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J7EMY8" FT /protein_id="ADZ96611.1" FT /translation="MDSRTGESLSHAQTMRALDFDTNPMSAGRTAPFNLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCSWIDEVDTIDCTDDVKILLY" FT CDS complement(1226..1672) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J7EPK5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7EPK5" FT /protein_id="ADZ96612.1" FT /translation="MSNLPSGIKRKCPIQEPLHAAAKKAKRKVPETRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRLRHQPHVCGSDCTIQPEADVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1581..2675) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J7EPK4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7EPK4" FT /protein_id="ADZ96613.1" FT /translation="MAPPKRFRISSKNYFITYPRCSLSKEDCLAQLLHIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPTRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQHH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WDQEEVSHSGATARSSEEGQEESS" FT CDS complement(2261..2518) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EPY4" FT /protein_id="ADZ96614.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLSHQQGRITFTPTSRELNPR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2829 BP; 736 A; 582 C; 690 G; 821 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccacaaa tgggcaacgc gtttttcccg 60 tacttacttt taatgatgac attgctttat aaggaccaat gctgttccag tcttggtcgc 120 caagtatggc tgatttgtgg gaccctttgc agaacccact accagatact ttatacggtt 180 ttaggtgtat gctatccgta aaatacttgc aaagtatttt gaaaaaatac gagccaggaa 240 ccctagggtt cgagctctgt tcggagttaa tccgtatctt cagggtcagg cagtatgaca 300 gggcgaatgc gcgttacgca gagatttcat ccgtatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa agaggggtga ccgcatcccg 480 aagggatgtg ttggtccctg taaggtccag gactatgagt tcaagatgga cgttcctcac 540 aggggaacgt ttgtctgtgt ctcggatttt acaaggggaa ctgggcttac tcatcgcctg 600 ggtaagcgtg tttgtgttaa gtctatgggt atcgatggga aggtctggat ggatgacaat 660 gttgcgaaga gagatcacac caatatcatc acgtattggt tgattcgtga caggaggccc 720 aataaggatc cgctgaactt tgatcaagta ttcaccatgt atgacaatga gccgactact 780 gctaagatcc gaatggatct gagagataga atgcaggtgt tgaagaagtt ctcagttaca 840 gtttcgggag gtccatacaa tcataaggag caggcattag ttaggaagtt ttttaagggt 900 ttgtataatc atgtgactta taatcacaag gaagaagcta aatatgagaa tcagttagaa 960 aatgctctta tgctgtatag tgctagcagt catgctagca atcctgtgta tcagaccctg 1020 cgttgcaggg cttattttta tgattcacac aataattaat aaaattttat tttattaata 1080 cagtaatatc tttacatcat cagtacagtc gattgtatct acttcatcta tccaagaaca 1140 tactcttgga agatatctaa taacaaaaac taaattaact agactaagaa accctaaact 1200 agctaattca ttacatattc gccatttaag gcgttccaaa ataccagtcc agctgtgaat 1260 agcaccagtt agccgggttg tcgatatcct gaattgcagg aagatcttgt ggaaaccaag 1320 ttgtttcctc tcccggtagt tgaccctcat ttggaatttg aggatggttc tcccctgtgc 1380 gctctcgtgg acgtacatca gcctcaggtt gaatggtgca gtccgacccg cagacatggg 1440 gttggtgtcg aagtctagtg ctctcatagt ctgagcatga cttagtgatt cccctgtgcg 1500 tgaatccatg ctggaatttg caggtttggg ttatgaaggc tgagcatccg caacccttcc 1560 acactatcct cgtccttgtt tcaggaactt tcctcttggc cttcttcgct gctgcgtgca 1620 gtggctcctg aatgggacac ttcctcttga tcccagaagg gagattggac atcgcagaat 1680 atagcgtttg ctgttgccca attcttgagt gctccttgct ctggtttgtc tagccagagt 1740 ttaaatgatg aaccctctcc tggattgcag aggaagatag tgggaattcc gcctttaatt 1800 tgaactggct ttccgtattt acagttggat tgccagtcct tctgggcccc catgaattct 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctgtaaactt ttggactaag atctaaatgc ccacacaaat aattgtgagg gcccaaagac 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc catgacattt tcagcggccc agtcgctgat aatgtcagga 2100 acggcattga aagaagatga agaaaaaggt gaagaatata cagaaggtgg aggagaaaaa 2160 atcctatcta aattagaaac taaattatga tgttgaaata aatatttttc agggagcttc 2220 tccctgatta tttgcaacgc agcttcttta gaacctgcgt ttagagcctc tgcggctgcg 2280 tcgttagcag tctgctgacc tcctctagca gatctgccgt cgatctggaa ttcaccccag 2340 gtgagggtat ccccgtcctt atcaacgtag gacttgacat cggacgagga tttagctccc 2400 tggatgttgg ggtgaaagtg attcgacctt gttggtgaga caaggtcgaa gaatctgcta 2460 tttgtgcaga cgaatttacc ttcgaactgc accagcacat ggaggtgagg ttccccatcc 2520 tcgtgcagtt ctttggctat gtgtatgtat tttttgttgg ttggggtttg gatgtgtagt 2580 agttgggcta ggcagtcctc tttagagaga gaacagcgtg gataagtaat gaaatagttt 2640 tttgaagaaa ttctaaaacg tttgggcgga gccatttggt gacactcata ctttcaaatg 2700 aattggtgac tggtgacaat ttatactatg tcaccaaatg gcattttggt aatttagaag 2760 atccttttag ctttaattca aattccgaca actctgggtc caccaaaagg cgggcaccgt 2820 attaatatt 2829 //