ID HQ393462; SV 1; circular; genomic DNA; STD; VRL; 2828 BP. XX AC HQ393462; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato leaf curl virus isolate SPLCV-PE[BR:Cau1:09], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2828 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2828 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; bfe86c3e2d747a35f5ef78b0886471cb. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /strain="Pernambuco" FT /isolate="SPLCV-PE[BR:Cau1:09]" FT /mol_type="genomic DNA" FT /country="Brazil:Pernambuco" FT /lat_lon="8.14 S 35.47 W" FT /collected_by="Simone G. Ribeiro" FT /collection_date="2009" FT /clone="PE49Bam76" FT /db_xref="taxon:100755" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J7EPK2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J7EPK2" FT /protein_id="ADZ96591.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSIKYLQSILKKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PEX4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PEX4" FT /protein_id="ADZ96592.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMEVPHRGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLLRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRTDLRDRMQVLKKFSVTVSGGSYNHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PEJ2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PEJ2" FT /protein_id="ADZ96593.1" FT /translation="MDSRTGESLNHAQTMRALEFDTNPMSAGRTAPFHLRLMYVHESAQ FT GRTILKFQMRVNHRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNEIAS FT LGFISLVNLVFVIRYLPRVCSWIDEIDTIDCTDDVKVLLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J7EPY1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7EPY1" FT /protein_id="ADZ96594.1" FT /translation="MSNLPSGIKRKCPIQEPLHEAAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPPETDVRPRERTGENHP FT QIPNEGQPSGEETTWFPQDLPAVQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J7EMY5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7EMY5" FT /protein_id="ADZ96595.1" FT /translation="MAPPKRFKIQAKNYFITYPRCSLSKEDCLAQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPSRSNHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAAMQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPSSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSNSGATARSGEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EPK3" FT /protein_id="ADZ96596.1" FT /translation="MGNLTSMCWCSSKVNSSAQIADSSTLCHPQGRITFTPTSRELNHR FT PMSSPTLIRTGIPSPGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2828 BP; 750 A; 581 C; 677 G; 820 T; 0 other; accggtgccc gccgcgcccc ttaaaagtgg gccccaccaa tgacaacgcg tattttccgt 60 actctctttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gaattgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccataa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggaa gttcctcaca 540 ggggaacgtt tgtctgtgtc tcggatttta caagggggac tgggcttaca catcgccttg 600 gtaagcgtgt ttgtgttaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gcttcgtgac aggaggccca 720 ataaggatcc actgaacttt gatcaagttt tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aacggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg ttcatacaat cataaagagc aggcattaat taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaaag aagaagctaa atatgagaat cagttagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttttat gattcacaca ataattaata aacttttatt ttattaatac 1080 agtaatacct ttacatcatc agtacaatcg attgtatcta tttcatctat ccaagaacat 1140 actcttggga gatatctaat aacaaaaact aaattaacta gactaataaa ccctaaacta 1200 gctatttcat tacatattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggttgt cgatatcctg aactgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccgatggtt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcag tctcaggtgg aatggtgcag tccgacccgc agacatgggg 1440 ttggtgtcga attctagtgc tctcatagtc tgagcatgat ttagtgattc ccctgtgcgt 1500 gaatccatgc tggaatttgc aggtttgggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgatt caggaacttt cctcttggcc ttcttcgccg cttcgtgcag 1620 tggctcctga attggacact tcctcttgat tccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagtttgatt gccagtcctt ctgggccccc atgaattctt 1860 taaagtgctt taggtattgt gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tgtaaacttt tggactaaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ccggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagaagaa gaaaaaggtg aagaatatac agaagatggt ggagaaaaaa 2160 tcctatctaa attagaaact aaattatgat attgaaataa atatttttca gggagcttct 2220 ccctgattat ttgcatcgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccagg 2340 tgagggtatc cccgtcctta tcaacgtagg acttgacatc ggacgatgat ttagctccct 2400 ggatgttggg gtgaaagtga ttcgaccttg agggtgacac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttacct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggctatg tgtatgtatt ttttgttggt tggggtttgg atatttagca 2580 gttgggctag gcagtcctct ttagagagag aacagcgtgg ataggtaatg aaataatttt 2640 tggcttggat tttaaaacgt ttgggaggag ccatttggag acaatcaata attcaaatga 2700 attggagact ggagacaata tatagtatgt ctccaaatgg cattttggta attaagaaga 2760 tccttttagc tttaattcaa aatccgacaa cgttgggccc acctaaaggc gggcaccgta 2820 ttaatatt 2828 //