ID HQ393459; SV 1; circular; genomic DNA; STD; VRL; 2834 BP. XX AC HQ393459; XX DT 27-MAR-2011 (Rel. 108, Created) DT 14-NOV-2012 (Rel. 114, Last updated, Version 4) XX DE Sweet potato golden vein associated virus isolate SPGVaV-RO[BR:Cac:08], DE complete genome. XX KW . XX OS Sweet potato golden vein associated virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2834 RX PUBMED; 23082767. RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Moriones E., Navas-Castillo J.; RT "Genetic diversity and recombination analysis of sweepoviruses from RT Brazil"; RL Virol J 9:241-241(2012). XX RN [2] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Moriones E., Navas-Castillo J.; RT "Genetic diversity by extensive recombination in the complex of monopartite RT begomoviruses infecting sweet potato in Brazil"; RL Unpublished. XX RN [3] RP 1-2834 RA Albuquerque L.C., Inoue-Nagata A.K., Pinheiro B., Resende R.O., RA Ribeiro S.G., Navas-Castillo J.; RT ; RL Submitted (11-OCT-2010) to the INSDC. RL Virology, Embrapa Vegetables, Km 09, BR060, Brasilia, DF 70359-970, Brazil XX DR MD5; f8794360635c99895af2930c31ed7f7e. XX FH Key Location/Qualifiers FH FT source 1..2834 FT /organism="Sweet potato golden vein associated virus" FT /host="Ipomoea batatas" FT /strain="Rondonia" FT /isolate="SPGVaV-RO[BR:Cac:08]" FT /mol_type="genomic DNA" FT /country="Brazil:Rondonia" FT /lat_lon="13.21 S 61 W" FT /collected_by="Joao Bosco Silva" FT /collection_date="2008" FT /clone="370Bam9" FT /db_xref="taxon:688540" FT CDS 98..469 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:J9PEI9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9PEI9" FT /protein_id="ADZ96573.1" FT /translation="MLFQSWSPSMAELWDPLQNPLPDTLYGFRCMLSVKYLQSILRKYE FT PGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYRALHWECCPN FT CCPKLCPGFKRRPDEEKEG" FT CDS 294..1058 FT /codon_start=1 FT /product="V1" FT /note="CP" FT /db_xref="GOA:J9PED8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9PED8" FT /protein_id="ADZ96574.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFDQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1074..1508) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:J9PE90" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9PE90" FT /protein_id="ADZ96575.1" FT /translation="MDSRTGESLNRAQIMRALEFDNNPMSAGRTAPFHLRLMYVHESAQ FT GRTILKFQMRVNYRERKQLGFHKIFLQFRISTTRLTGAIHSWTGILERLKWRICNELAS FT LGFLSLVNLVFVIRYLPRVCPWIDEVDTIDCTDDVKVLLY" FT CDS complement(1225..1671) FT /codon_start=1 FT /product="C2" FT /note="Trap" FT /db_xref="GOA:J9PEP1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9PEP1" FT /protein_id="ADZ96576.1" FT /translation="MSNLRSGIKRKCPIQEPLHAAAKKAKRKVPESRTRIVWKGCGCSA FT FITQTCKFQHGFTHRGITKSCSDYESTRIRQQPHVCGSDSTIPPEIDVRPRERTGENHP FT QIPNEGQLPGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1580..2674) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:J9PEX0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9PEX0" FT /protein_id="ADZ96577.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALSQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSKDAALQIIREKLPEKFIFQYH FT NLISNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKDWATANVIFCDVQSPF FT WNQEEVSNSGATARSSEEGQEESS" FT CDS complement(2260..2517) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7EL35" FT /protein_id="ADZ96578.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTTQQQKH" XX SQ Sequence 2834 BP; 750 A; 578 C; 661 G; 845 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccaa ttggcaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatg ctgttccagt cttggtcgcc 120 aagtatggct gaattgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg agaaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg attacgagtt caagatggac gttcctcaca 540 cgggaacgtt tgtctgtgtt tctgatttta caagggggac tgggcttacc catcgtttgg 600 gtaagagggt gtgtataaag tcaatgggta tcgatgggaa ggtctggatg gatgacaatg 660 ttgcgaagag agatcacacc aatatcatca cgtattggtt gattcgtgac aggaggccca 720 ataaggatcc actgaacttt gatcaagtat tcaccatgta tgacaatgag ccgactactg 780 ctaagattcg aatggatctg agagatagaa tgcaggtgtt gaagaagttc tcagttacag 840 tttcaggagg tccatacaat cataaggagc aggcattagt taggaagttt tttaagggtt 900 tgtataatca tgtgacttat aatcacaaag aagaagctaa atatgagaat caattagaaa 960 atgctcttat gctgtatagt gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttttat gattcgcaca ataattaata aacttttatt ttattaatac 1080 agtaatacct ttacatcatc agtacagtcg attgtatcta cttcatctat ccaaggacat 1140 actcttggaa gatatctaat aacaaaaact aaattaacta gactaagaaa ccctaaacta 1200 gctaattcat tacagattcg ccatttaagg cgttccaaaa taccagtcca gctgtgaata 1260 gcaccagtta gccgggttgt cgatatcctg aattgcagga agatcttgtg gaaaccaagt 1320 tgtttcctct cccggtagtt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga cgtacatcaa tctcaggtgg aatggtgctg tccgacccgc agacatgggg 1440 ttgttgtcga attctagtgc tctcataatc tgagcacgat ttagtgattc ccctgtgcgt 1500 gaatccatgc tggaatttgc aggtttgggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtccttgatt caggaacttt cctcttggcc ttcttcgctg ctgcgtgcag 1620 tggctcctga attggacact tcctcttgat tccagaacgg agattggaca tcgcagaata 1680 taacgtttgc tgttgcccaa tccttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgaaga gccttctcct ggattgcata ggaagatagt gggtattcca cctttaattt 1800 gaactggctt tccgtattta caattgcttt gccagtcttt ctgggccccc ataaactctt 1860 taaagtgctt taagtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tatacacctt tggactcagg tccaaatgcc cacacagata attatgtggg cctaaggatc 1980 tagcccatac tgttttacct attctacttg ggccttctat aactatactt atgggcctat 2040 ctggccgcgc agcggaatcc atgacattct cagcagccca atcactgata atgtcaggaa 2100 cattattgaa agaagaaatg gaaaaaggtg aagaataaac agaaggagga ggagaaaaaa 2160 tcctatctaa attgctaatt aaattatgat attgaaatat aaatttttca gggagtttct 2220 ccctgattat ttgtaaagca gcgtccttac ttcctgcatt taatgcttct gctgctgcgt 2280 cgttagcagt ctgctggcct cctctagcag atctgccgtc gacctggaat tcgccccatt 2340 ccaatgtgtc tccatcctta tcgacgtagg acttgacgtc ggagctggat ttagctcttt 2400 gaatgttagg atggaaatgt gctgacctgg tttgagagac caggtcgaat aggcgttggt 2460 tcgtgcactg gaatttgcct tcgaattgca gaagcacatg gagatgaggt tgcccatctt 2520 cgtgtagttc cctgcagatt ttaatgaatt ttttatttac tgcagttggg atattttgga 2580 tttgggataa tgcttcttct ttggagatag agcattgggg atatgtaaga aaataatttt 2640 tggcatttat attgaacctc ccggctctcg gcattttaag aagcaatggg tggacacaca 2700 aactctatat gaattggtgg aagggtggac aatatatatg tgtccaccta atggcatttt 2760 ggtaattaga acaactttaa tttgaattca gaaatcttat tggttcgcca taaagcgggc 2820 accgtattaa tatt 2834 //