ID HQ189463; SV 2; linear; genomic RNA; STD; VRL; 1906 BP. XX AC HQ189463; XX DT 05-FEB-2012 (Rel. 111, Created) DT 18-AUG-2013 (Rel. 117, Last updated, Version 2) XX DE Heterobasidion RNA virus 6 strain HetRV6-pa13-a putative RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Heterobasidion RNA virus 6 OC Viruses; dsRNA viruses. XX RN [1] RP 1-1906 RA Vainio E.J.; RT "A novel virus infecting Heterobasidion spp. fungi"; RL Unpublished. XX RN [2] RP 1-1906 RA Vainio E.J.; RT ; RL Submitted (27-AUG-2010) to the INSDC. RL Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB RL 18, Vantaa, Finland 01301, Finland XX RN [3] RC Sequence update by submitter RP 1-1906 RA Vainio E.J.; RT ; RL Submitted (16-AUG-2013) to the INSDC. RL Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB RL 18, Vantaa, Finland 01301, Finland XX DR MD5; 7ec4863376f7eca6dc4066b8b2c63674. XX CC On Aug 16, 2013 this sequence version replaced gi:374341507. XX FH Key Location/Qualifiers FH FT source 1..1906 FT /organism="Heterobasidion RNA virus 6" FT /host="Heterobasidion parviporum" FT /strain="HetRV6-pa13-a" FT /isolate="7R.124" FT /mol_type="genomic RNA" FT /country="Finland" FT /collected_by="Tuula Piri" FT /db_xref="taxon:980634" FT CDS 56..1876 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:H6T455" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:H6T455" FT /protein_id="AEZ35182.2" FT /translation="MSTPSSFQNISLPPTPRFKRLRDEEDDASSSSYTGTSRSVLTGDN FT SDGTSHAERRKKRRKTKKELFAEGEVGELIRRFDKLRYVARAVPYRALDRQPILADPDP FT VMVEYMKTHPEVRIPCDPAEWVFVKANSVVELNHLDRFNRTYTDLTMEHMPAVTLAAGH FT VEDLLRLPAAIVFPTIDDLDKVRFQGDKFAGVEYAQIGMKSRREAHERGLLDAREAWEK FT LMRGEAVTPQLNRIGGRGKLTTKKKFEASGEKPTAGRLIFMTGHRDLLLNGVTEQLLTN FT AYRPDEYPVSVGNSWWHDGCRRFFERFKKWELFHCFDAAKFDSSLPPWLIKISLNILRS FT AFLDAWNPKYDAYWEFVFQGLVYAPVYLDNGLMFIRNGGSTSGHSYNTLMQSICTLVMI FT YACMIELLGADRAEEVFANMWAEGLGDDQHTGMSGPLVKYDIDDIAPVALAIAGIDWTG FT DKSFNTGRLVDTKLGDFQGTQYLGKYFRILDEDVGGIRAQGVVPYRPFDETFLRLYYPE FT RGDQGWTDAWMRAIGHYADGAGNPETRGFLEGYLDWLEDKVESDKFEWDEKWKRKFNNH FT DLNRAVPVPARRIAYEDWLGLVLIDPSSED" XX SQ Sequence 1906 BP; 413 A; 471 C; 600 G; 422 T; 0 other; ggggttttca tttcgaacga aagcttttcc tcctaagcac tttgctcagt ttccaatgtc 60 gactccatcc tcatttcaga acatttcttt gccgccaacc ccccgtttca aacgtctccg 120 cgacgaggag gacgacgcct cctcgtcgag ctataccggg acgtcccgtt cagtcttgac 180 gggggataat tcggacggta ccagccacgc cgaacgcagg aagaagagac gcaagaccaa 240 gaaggagtta ttcgcggagg gggaagtggg cgagcttatc cgccgattcg acaagctacg 300 ttatgtggct agggcggttc cttaccgcgc cttggatcgc caaccgatct tggcggatcc 360 agatcctgtg atggtggagt acatgaagac tcatccggag gtacggatcc cgtgtgatcc 420 cgcggagtgg gtctttgtca aagccaactc ggtcgtcgaa ttgaatcacc tggatcgttt 480 caaccgcacc tacaccgacc ttacgatgga gcacatgccc gcggttaccc tagccgctgg 540 gcacgtcgag gatttactgc ggttgcccgc cgccatcgtg ttccccacta tcgatgacct 600 cgacaaggtg cggttccagg gggataagtt tgcaggggtt gagtatgcgc agattggcat 660 gaaatcgcgc agggaggctc atgagagagg cttgttagat gccagggagg cgtgggagaa 720 gttgatgaga ggcgaggcgg ttaccccgca gctgaaccgg atcggcggga ggggcaagct 780 gacgacaaag aagaagttcg aggcgtctgg agagaagccg accgcaggtc ggctgatttt 840 tatgacgggg caccgcgatc ttctgttgaa cggcgtcaca gagcagttgt tgaccaacgc 900 ttaccggccc gatgagtacc ccgtatcggt gggaaattcg tggtggcacg acggttgtcg 960 tcgcttcttc gagagattca agaagtggga gctgttccac tgtttcgacg ccgcgaagtt 1020 tgattcgtcg ctacccccgt ggctcatcaa gattagtttg aacatcttga gaagcgcgtt 1080 cctcgacgcg tggaacccga aatatgacgc ctactgggag ttcgtcttcc aggggttagt 1140 ctacgctccg gtttacctgg ataatgggtt gatgttcatc cgaaatggtg ggtcaaccag 1200 cggccactcc tacaatactc tcatgcagtc gatctgcacc ctggtcatga tctacgcctg 1260 catgattgag ctattgggag cggatagggc ggaggaggtg tttgcgaaca tgtgggcgga 1320 ggggctcgga gacgaccaac acactggcat gagtggaccg ctggtgaaat acgatatcga 1380 tgatattgcg ccagtggccc ttgccatcgc cggtattgat tggacgggcg ataagtcctt 1440 caacaccggg cggctcgtcg acacgaaact gggagatttc cagggtactc agtaccttgg 1500 gaaatacttt cgtattctcg acgaggatgt gggtggaatc cgtgcgcagg gcgtagtccc 1560 ctaccgcccg ttcgatgaaa ccttccttcg attgtactac ccggagaggg gggatcaagg 1620 ctggacggac gcttggatgc gcgccatcgg gcactatgcg gacggggcag gtaatccgga 1680 gacgcggggg ttcttggagg ggtatttgga ttggttagag gataaggttg agtcggacaa 1740 gtttgagtgg gacgagaaat ggaagcgtaa gttcaacaac cacgatctca acagggccgt 1800 ccccgttcca gcacggcgga tcgcgtacga ggattggtta gggttggtgt tgattgatcc 1860 gagcagcgag gactaggttt acctcaacga gggggcgtag acacat 1906 //