ID   HQ189463; SV 2; linear; genomic RNA; STD; VRL; 1906 BP.
XX
AC   HQ189463;
XX
DT   05-FEB-2012 (Rel. 111, Created)
DT   18-AUG-2013 (Rel. 117, Last updated, Version 2)
XX
DE   Heterobasidion RNA virus 6 strain HetRV6-pa13-a putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion RNA virus 6
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1906
RA   Vainio E.J.;
RT   "A novel virus infecting Heterobasidion spp. fungi";
RL   Unpublished.
XX
RN   [2]
RP   1-1906
RA   Vainio E.J.;
RT   ;
RL   Submitted (27-AUG-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa, Finland 01301, Finland
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1906
RA   Vainio E.J.;
RT   ;
RL   Submitted (16-AUG-2013) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB
RL   18, Vantaa, Finland 01301, Finland
XX
DR   MD5; 7ec4863376f7eca6dc4066b8b2c63674.
XX
CC   On Aug 16, 2013 this sequence version replaced gi:374341507.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1906
FT                   /organism="Heterobasidion RNA virus 6"
FT                   /host="Heterobasidion parviporum"
FT                   /strain="HetRV6-pa13-a"
FT                   /isolate="7R.124"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /collected_by="Tuula Piri"
FT                   /db_xref="taxon:980634"
FT   CDS             56..1876
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:H6T455"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:H6T455"
FT                   /protein_id="AEZ35182.2"
FT                   /translation="MSTPSSFQNISLPPTPRFKRLRDEEDDASSSSYTGTSRSVLTGDN
FT                   SDGTSHAERRKKRRKTKKELFAEGEVGELIRRFDKLRYVARAVPYRALDRQPILADPDP
FT                   VMVEYMKTHPEVRIPCDPAEWVFVKANSVVELNHLDRFNRTYTDLTMEHMPAVTLAAGH
FT                   VEDLLRLPAAIVFPTIDDLDKVRFQGDKFAGVEYAQIGMKSRREAHERGLLDAREAWEK
FT                   LMRGEAVTPQLNRIGGRGKLTTKKKFEASGEKPTAGRLIFMTGHRDLLLNGVTEQLLTN
FT                   AYRPDEYPVSVGNSWWHDGCRRFFERFKKWELFHCFDAAKFDSSLPPWLIKISLNILRS
FT                   AFLDAWNPKYDAYWEFVFQGLVYAPVYLDNGLMFIRNGGSTSGHSYNTLMQSICTLVMI
FT                   YACMIELLGADRAEEVFANMWAEGLGDDQHTGMSGPLVKYDIDDIAPVALAIAGIDWTG
FT                   DKSFNTGRLVDTKLGDFQGTQYLGKYFRILDEDVGGIRAQGVVPYRPFDETFLRLYYPE
FT                   RGDQGWTDAWMRAIGHYADGAGNPETRGFLEGYLDWLEDKVESDKFEWDEKWKRKFNNH
FT                   DLNRAVPVPARRIAYEDWLGLVLIDPSSED"
XX
SQ   Sequence 1906 BP; 413 A; 471 C; 600 G; 422 T; 0 other;
     ggggttttca tttcgaacga aagcttttcc tcctaagcac tttgctcagt ttccaatgtc        60
     gactccatcc tcatttcaga acatttcttt gccgccaacc ccccgtttca aacgtctccg       120
     cgacgaggag gacgacgcct cctcgtcgag ctataccggg acgtcccgtt cagtcttgac       180
     gggggataat tcggacggta ccagccacgc cgaacgcagg aagaagagac gcaagaccaa       240
     gaaggagtta ttcgcggagg gggaagtggg cgagcttatc cgccgattcg acaagctacg       300
     ttatgtggct agggcggttc cttaccgcgc cttggatcgc caaccgatct tggcggatcc       360
     agatcctgtg atggtggagt acatgaagac tcatccggag gtacggatcc cgtgtgatcc       420
     cgcggagtgg gtctttgtca aagccaactc ggtcgtcgaa ttgaatcacc tggatcgttt       480
     caaccgcacc tacaccgacc ttacgatgga gcacatgccc gcggttaccc tagccgctgg       540
     gcacgtcgag gatttactgc ggttgcccgc cgccatcgtg ttccccacta tcgatgacct       600
     cgacaaggtg cggttccagg gggataagtt tgcaggggtt gagtatgcgc agattggcat       660
     gaaatcgcgc agggaggctc atgagagagg cttgttagat gccagggagg cgtgggagaa       720
     gttgatgaga ggcgaggcgg ttaccccgca gctgaaccgg atcggcggga ggggcaagct       780
     gacgacaaag aagaagttcg aggcgtctgg agagaagccg accgcaggtc ggctgatttt       840
     tatgacgggg caccgcgatc ttctgttgaa cggcgtcaca gagcagttgt tgaccaacgc       900
     ttaccggccc gatgagtacc ccgtatcggt gggaaattcg tggtggcacg acggttgtcg       960
     tcgcttcttc gagagattca agaagtggga gctgttccac tgtttcgacg ccgcgaagtt      1020
     tgattcgtcg ctacccccgt ggctcatcaa gattagtttg aacatcttga gaagcgcgtt      1080
     cctcgacgcg tggaacccga aatatgacgc ctactgggag ttcgtcttcc aggggttagt      1140
     ctacgctccg gtttacctgg ataatgggtt gatgttcatc cgaaatggtg ggtcaaccag      1200
     cggccactcc tacaatactc tcatgcagtc gatctgcacc ctggtcatga tctacgcctg      1260
     catgattgag ctattgggag cggatagggc ggaggaggtg tttgcgaaca tgtgggcgga      1320
     ggggctcgga gacgaccaac acactggcat gagtggaccg ctggtgaaat acgatatcga      1380
     tgatattgcg ccagtggccc ttgccatcgc cggtattgat tggacgggcg ataagtcctt      1440
     caacaccggg cggctcgtcg acacgaaact gggagatttc cagggtactc agtaccttgg      1500
     gaaatacttt cgtattctcg acgaggatgt gggtggaatc cgtgcgcagg gcgtagtccc      1560
     ctaccgcccg ttcgatgaaa ccttccttcg attgtactac ccggagaggg gggatcaagg      1620
     ctggacggac gcttggatgc gcgccatcgg gcactatgcg gacggggcag gtaatccgga      1680
     gacgcggggg ttcttggagg ggtatttgga ttggttagag gataaggttg agtcggacaa      1740
     gtttgagtgg gacgagaaat ggaagcgtaa gttcaacaac cacgatctca acagggccgt      1800
     ccccgttcca gcacggcgga tcgcgtacga ggattggtta gggttggtgt tgattgatcc      1860
     gagcagcgag gactaggttt acctcaacga gggggcgtag acacat                     1906
//