ID   HQ189460; SV 1; linear; genomic RNA; STD; VRL; 2050 BP.
XX
AC   HQ189460;
XX
DT   09-FEB-2011 (Rel. 107, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Heterobasidion RNA virus 6 strain HetRV6-ab10 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion RNA virus 6
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-2050
RX   PUBMED; 22138214.
RA   Vainio E.J., Hyder R., Aday G., Hansen E., Piri T., Dogmus-Lehtijarvi T.,
RA   Lehtijarvi A., Korhonen K., Hantula J.;
RT   "Population structure of a novel putative mycovirus infecting the conifer
RT   root-rot fungus Heterobasidion annosum sensu lato";
RL   Virology 422(2):366-376(2012).
XX
RN   [2]
RP   1-2050
RA   Vainio E.J.;
RT   ;
RL   Submitted (27-AUG-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1,
RL   Vantaa 01301, Finland
XX
DR   MD5; 7444f637db11ed4db63bcf93bdf01b37.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2050
FT                   /organism="Heterobasidion RNA virus 6"
FT                   /host="Heterobasidion abietinum"
FT                   /strain="HetRV6-ab10"
FT                   /isolate="07052"
FT                   /mol_type="genomic RNA"
FT                   /country="Austria"
FT                   /collected_by="Gregor Unger"
FT                   /db_xref="taxon:980634"
FT   CDS             76..1896
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:E9M4A0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:E9M4A0"
FT                   /protein_id="ADW82834.1"
FT                   /translation="MSTPSSFQNISLPPTPRFKRLRDEEEDASSSSYTGTSRSVLTGDN
FT                   SDGTSHAERRKKRRKTKRELFAEGEVGELIRRFDKLRYVARAVPYRALDRQPILADPDP
FT                   VMVEYMKTHPEVRIPCDPAEWVFVKANSVVELNHLDRFNRTYTDLTMEHMPAVTLAAGH
FT                   VEDLLRLPAAIVFPTIDDLDRVRFQGDKFAGVEYAQIGMKSRREAHERGLLDAREAWEK
FT                   LMRGEAVTPQLNRIGGRGKLTTKKKFEASGEKPTAGRLIFMTGHRDLLLNGVTEQLLTN
FT                   AYRPDVYPVSVGNSWWHDGCRRFFERFKKWELFHCFDAAKFDSSLPPWLIKISLNILRS
FT                   AFLDAWNPKYDAYWEFVFQGLVYAPVYLDNGLMFIRNGGSTSGHSYNTLMQSICTLVMI
FT                   YACMIELLGADRAEEVFASMWAEGLGDDQHTGMSGPLIKYDIDDIAPVALAIAGIDWTG
FT                   DKSFNTGRLVDTKLGDFQGTQYLGKYFRILDEDVGGIRAQGVIPYRPFDETFLRLYYPE
FT                   RGDQGWTDAWMRAIGHYADGAGNPETREFLEGYLDWLEDKVESDKFEWDEKWKRKFNNH
FT                   DLNRAVPVPARRISYEDWLGLVLIDPSSED"
XX
SQ   Sequence 2050 BP; 447 A; 511 C; 642 G; 450 T; 0 other;
     caataaagaa gggacctcag ggggttttca tttcgaacga aagcttttcc tcctaaacac        60
     tttgctaagt ttcccatgtc gactccatcc tcatttcaga acatttcttt accgccaacc       120
     ccccgtttca aacgcctccg cgacgaggag gaagacgcct cctcgtcgag ctacaccggg       180
     acttcgcgtt cagtcttgac gggggataac tcggacggta ccagccacgc cgaacgcagg       240
     aagaagagac gcaagaccaa gagggagtta ttcgcggagg gggaggtggg cgagcttatc       300
     cgacgattcg acaagctgcg ttacgtagct agggcggtac cttaccgcgc cttggaccgc       360
     caaccgatct tggcggatcc agatcccgtg atggtggagt acatgaagac tcatccggag       420
     gtacggatcc cgtgtgatcc cgcggagtgg gtctttgtca aagccaactc ggtcgtcgaa       480
     ttgaatcacc tggaccgttt caaccgcacc tacaccgacc ttacaatgga gcacatgccc       540
     gcagtcacat tggccgccgg gcacgtcgag gatttattgc ggttgcccgc cgccatcgtg       600
     ttcccaacta tcgatgacct cgacagggtg cggttccagg gggataagtt tgccggagtg       660
     gaatatgcgc agattggtat gaagtcgcgc agggaggccc atgaaagggg tctgttggac       720
     gctagggagg cttgggagaa gttgatgagg ggagaggcgg ttaccccgca gctgaaccgg       780
     atcggcggaa ggggcaagct gacgacaaag aagaagttcg aggcgtctgg ggagaagccg       840
     accgcaggtc ggctgatttt catgacgggg caccgcgatc ttctgttgaa cggcgtcacc       900
     gagcagttgt tgaccaacgc ttaccggccc gatgtgtacc ccgtctcggt gggaaattcg       960
     tggtggcacg acggttgtcg tcgcttcttt gagagattca agaagtggga gttgttccac      1020
     tgtttcgacg ctgcgaagtt tgattcgtcg ctacccccgt ggctcatcaa gattagtttg      1080
     aacatcttga gaagcgcgtt cttggacgcg tggaacccga agtatgacgc ctactgggag      1140
     ttcgtcttcc aggggttagt ctatgctcca gtttacctgg ataatgggtt gatgttcatt      1200
     cgaaatggtg ggtcaaccag cggccactcc tacaatactc tcatgcagtc gatctgcacc      1260
     ttggtcatga tctacgcctg catgattgag ctattgggag cggacagggc ggaggaggtt      1320
     ttcgcgagca tgtgggcgga agggttagga gacgaccagc acactggcat gagtggcccg      1380
     ctgattaagt acgatattga tgatatcgca ccagtggccc tcgccatcgc aggtattgat      1440
     tggactgggg acaagtcctt caacaccggg cggctcgtcg acacgaaact gggagatttc      1500
     cagggtactc agtaccttgg aaaatacttt cgcattcttg acgaggatgt gggtggaatc      1560
     cgtgcacagg gtgtaatccc ctaccgcccg ttcgatgaga ccttccttcg attgtactac      1620
     cccgagaggg gggaccaagg ttggacggac gcttggatgc gcgcgatcgg acattacgcg      1680
     gacggagccg gcaatccgga gacgcgggag ttcctggaag ggtatttgga ctggttggag      1740
     gacaaggttg agtcggataa gtttgagtgg gatgagaagt ggaagcgtaa gttcaacaat      1800
     cacgacctca acagggccgt ccccgttcca gcacggcgga tttcgtacga ggactggttg      1860
     gggttggtgt tgattgatcc gagcagcgag gattaggttt accccaacga gggggcgtag      1920
     acacattagg aacttaaaca gacagccact tggaccccgg ggtccgctcc ctcgaagtct      1980
     ttccatcggg tctgcacact tgatggggga tgttcggagg ggcggccccc ggaaggtcct      2040
     cgggttgctg                                                             2050
//