ID HQ009520; SV 1; circular; genomic DNA; STD; VRL; 2542 BP. XX AC HQ009520; XX DT 13-DEC-2010 (Rel. 107, Created) DT 02-AUG-2011 (Rel. 109, Last updated, Version 2) XX DE Sida golden yellow vein virus-[Jamaica:Liguanea2:2008] clone pBrB1 segment DE DNA-B, complete sequence. XX KW . XX OS Sida golden yellow vein virus-[Jamaica:Liguanea2:2008] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2542 RX DOI; 10.1007/s00705-011-1030-z. RX PUBMED; 21625977. RA Stewart C.S., Kon T., Gilbertson R.L., Roye M.E.; RT "First report of the complete sequence of Sida golden yellow vein virus RT from Jamaica"; RL Arch. Virol. 156(8):1481-1484(2011). XX RN [2] RP 1-2542 RA Stewart C.S., Kon T., Gilbertson B.L., Roye M.E.; RT ; RL Submitted (02-AUG-2010) to the INSDC. RL The Biotechnology Centre, The University of the West Indies, Mona Road, RL Mona, St. Andrew Kgn 7, Jamaica XX DR MD5; 58b32bb5798ee03ed2cc99985dbd77e5. XX FH Key Location/Qualifiers FH FT source 1..2542 FT /organism="Sida golden yellow vein FT virus-[Jamaica:Liguanea2:2008]" FT /segment="DNA-B" FT /host="Sida sp." FT /mol_type="genomic DNA" FT /country="Jamaica" FT /collection_date="2004" FT /clone="pBrB1" FT /db_xref="taxon:929766" FT misc_feature 15..2397 FT /note="IR; contains sequences essential to the initiation FT of replication" FT gene 374..1150 FT /gene="NSP" FT CDS 374..1150 FT /codon_start=1 FT /gene="NSP" FT /product="nuclear shuttle protein" FT /function="transports viral DNA out of the nucleus and into FT the cytoplasm" FT /db_xref="GOA:E5KBZ5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:E5KBZ5" FT /protein_id="ADR77525.1" FT /translation="MNMYPFRNKRGSSFTQRRYYPRNTVFNRLTASKRHDVKLRLGHMN FT KPTDEPKMSAQRIHENQYSPEFVMSQNSAISTFISYPNLGKTEPNRSRSYIKLKRLRFR FT GTVKIERVQSDVNMDGSVPKLEGVFSIVVVVDRKPHLGPTGSLHTFDELFGAMIHSHGN FT LSITPSLKDRFYIRHVFKRVISVDKDTTMFDVGGSTTLSNRRFNCWASFKDFDCDSSKG FT VYDNISKNALLVYYCWMSDTMSKASNFVSFELDYIG" FT misc_feature complement(1186..2072) FT /note="similar movement protein; MP" XX SQ Sequence 2542 BP; 643 A; 525 C; 545 G; 829 T; 0 other; accggatggc cgcgctttgg tggccccctg gtgccctctc acgcgccctc ctctggtgct 60 cgctttccac gcgctctctc attggcgtag gtgtctcacg ctcttttttg tgtttgtcct 120 ttaattcaaa ttaaaggtta attctttatc gcgcgatttg accatattgg tcgcgatgac 180 tgactatgtc cacttttacc tgttggtgga cgtggcttga ttttgtccat gtcgctgagc 240 ctatttgtgt ttaactattg acctggcttt tctatatatt tgagagaaat atgtattata 300 tgttaagtgg ctcagctgtt ccccacgttt atatttttat tcctaataat agtttagcca 360 ttattattac cgtatgaata tgtatccttt taggaataaa cgtgggtcct cattcactca 420 acgtcgttat tatccacgca atactgtgtt taaccgttta accgcctcta agagacatga 480 tgtgaaacta cgactgggtc atatgaacaa gcccactgac gagcccaaga tgtcagccca 540 acgcatacat gagaatcaat atagtccaga gtttgttatg tcacaaaact ccgccatatc 600 aacctttatc agctatccta atctgggtaa gacagaaccc aatcgaagca ggtcttatat 660 aaagttgaaa cgactccgtt tcagagggac tgtgaagatt gagcgtgttc aatcggatgt 720 gaatatggat ggttctgttc ctaaattaga aggagttttt tctatcgttg tagtcgtgga 780 tcgtaaaccc cacttgggtc cgactggtag tcttcataca ttcgacgaac tatttggtgc 840 aatgatccat agtcatggta atcttagcat aaccccgtct ctgaaagatc ggttctatat 900 tcgacacgtg ttcaaacgtg tgatatctgt tgataaggat acgacaatgt ttgacgtggg 960 agggtctact acgctctcta ataggcgatt caattgttgg gcatcgttta aggattttga 1020 ttgtgactca agcaagggtg tatatgacaa tatcagcaag aacgctctat tagtttatta 1080 ttgttggatg tcagatacta tgtctaaggc atcgaatttt gtatcgtttg aactcgatta 1140 tatcggatga ttaataaaat aacatttatt aattacaata gttttttatt gcaatgattt 1200 aggctgagaa gccttgcaat tactattaat acattcatgg accgttgtcc taactaactc 1260 gttcaactgt cccatagtca ttgttatatt tgattccgct ctctgggctc ccactatcga 1320 agcagactca cccgggtcca atacggttgt acccagcctg ctcagatgtc tatatggatg 1380 gagctcgagc tcattctctg tctccgagtc cgcatctgat tgggccgtac ctattgtact 1440 cctggaagcc catgattctc ctggtcttat ttcgattggg cctcgtagcc cagttctgga 1500 catggacgcg catctgatgg gcttcctttc ccatttccca tagtccacat gggaaaagtc 1560 cacatctttg tctgtgaact gtttgacagt atctttaccg tcggtgcccg gaaggggata 1620 tccactgagt gtttggctgt ggacaatttc agcttccctt tgaatttggc gaagtgtgtc 1680 ctctgatgaa catttgtatc tgaaactctg taatagagtt tccatggaat tgggtctttg 1740 agtgagaaga aggaagctga gaaatagtgg agatctatgt tgcacctgat cggaaaagtc 1800 catgacgcct gtaatgactc attgtctgtc attcttttgt catgtatctc cactatcacc 1860 gtcccggaag cgttaatggg tacctgttgc ctgtactcaa ttacacagtg gtcgatcttc 1920 atacagcttc tgctaagtct cgccgttaat tgtgccgtcg tcgaagggaa ttgcataact 1980 atctcagtta agtcatggca tagctgatat tcatctctat gtgactctat atagttgaag 2040 gcacttggag gattcattaa ctgagattcc atctagaaga taaggccgcg cagcggcact 2100 gaccaccgag actgaactga taaagaaaaa actagggttt cttcttttga atagcttatg 2160 acgtctaact gaggacgaat tgacttcctg ggtattgacg atgaatatcg ttatgagaaa 2220 cccagaaatt tgcagaagaa acgaggaaca attgttgaac ttgtccagaa attgcttttg 2280 ttctttagaa agtggagaaa tattatcagt caagtgttgg gtataacatg ttagatctgg 2340 catatttata tacagacttt ttttttttgt tgatttattt gcatttttct atcgatggca 2400 tttttgtaat aataaggggt caccgattga ggctctctca aacttgctct agcaattggg 2460 gaacggggtc tcatttatac aagaagcctc aatagaactc tcaatctcgt tcgcacacgt 2520 ggcggccatc cgctataata tt 2542 //