ID   HM856624; SV 1; linear; genomic DNA; STD; VRL; 489 BP.
XX
AC   HM856624;
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DT   08-NOV-2010 (Rel. 106, Created)
DT   08-NOV-2010 (Rel. 106, Last updated, Version 1)
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DE   Tobacco leaf curl virus isolate COB1 pre-coat protein (AV2) gene, complete
DE   cds; and coat protein (AV1) gene, partial cds.
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KW   .
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OS   Tobacco leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
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RN   [1]
RP   1-489
RA   Saha A., Saha B., Saha D.;
RT   "Geminiviruses infecting cultivated tomato plants of sub-Himalayan plains
RT   of Eastern India: occurrence, detection, host range and diversity
RT   analysis";
RL   Unpublished.
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RN   [2]
RP   1-489
RA   Saha A., Saha B., Saha D.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   Department of Botany, University of North Bengal, Siliguri, West Bengal
RL   734013, India
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DR   MD5; 27fde4d006016709712992ed69042ee9.
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FH   Key             Location/Qualifiers
FH
FT   source          1..489
FT                   /organism="Tobacco leaf curl virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="COB1"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collection_date="12-Oct-2008"
FT                   /PCR_primers="fwd_seq: taatattacckgwkgvccsc, rev_seq:
FT                   tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:67762"
FT   gene            129..485
FT                   /gene="AV2"
FT   CDS             129..485
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="pre-coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:E5GEC6"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:E5GEC6"
FT                   /protein_id="ADP44676.1"
FT                   /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL
FT                   ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICDPCCCPHCPRHQIKSMGEQAHEQ
FT                   KAEDVQDVQKSRCP"
FT   gene            289..>489
FT                   /gene="AV1"
FT   CDS             289..>489
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:E5GEC7"
FT                   /db_xref="UniProtKB/TrEMBL:E5GEC7"
FT                   /protein_id="ADP44677.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVIRAAAPIVRVTKSRAWA
FT                   NRPMNRKPKMYRMYRSPDVPRG"
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SQ   Sequence 489 BP; 135 A; 116 C; 111 G; 127 T; 0 other;
     gggtcgtgat aatattacaa agtgggcccc ttgatgtgat atgtcatcca atcagaacgc        60
     tcccccaaag cttaattgtc ttgtggtccc ttatttaaac ttgctcacca agtagtgcac       120
     tccgcactat gtgggatcca ttagtaaacg agtttcccga aaccgttcac ggctttaggt       180
     gtatgttagc agttaaatat ctgcagttag tagagaagac ttattcgcct gacacattag       240
     ggcacgattt aattagggat ttaatttcag ttattagggc tagaaattat gtcgaagcga       300
     ccagcagata taatcatttc cacgcccgct tcgaaggtac gccgccgtct caacttcgac       360
     agcccatatg tgatccgtgc tgctgccccc attgtccgcg tcaccaaatc aagagcatgg       420
     gcgaacaggc ccatgaacag aaagccgaag atgtacagga tgtacagaag tccagatgtc       480
     cctagagga                                                               489
//