ID HM587709; SV 1; circular; genomic DNA; STD; VRL; 2752 BP. XX AC HM587709; XX DT 04-NOV-2010 (Rel. 106, Created) DT 04-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Chili leaf curl Pakistan virus isolate YN1045, complete sequence. XX KW . XX OS Chili leaf curl Pakistan virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2752 RA Ding M., Wang Y., Zhang Z.; RT "First report of Chili leaf curl Pakistan virus infecting pepper in Yunnan, RT China"; RL Unpublished. XX RN [2] RP 1-2752 RA Ding M., Wang Y., Zhang Z.; RT ; RL Submitted (23-JUN-2010) to the INSDC. RL Institute of Biotechnology and Genetic Resources, Yunnan Academy of RL Agricultural Sciences, Xueyun Road 9, Kunming, Yunnan 650223, China XX DR MD5; 95cde61a2f6a84b8c3ffe2ac2605dc46. XX FH Key Location/Qualifiers FH FT source 1..2752 FT /organism="Chili leaf curl Pakistan virus" FT /segment="DNA-A" FT /host="Capsicum annuum Linn. (pepper)" FT /isolate="YN1045" FT /mol_type="genomic DNA" FT /country="China:Yunnan" FT /collected_by="M. Ding" FT /collection_date="30-Oct-2009" FT /db_xref="taxon:341712" FT gene 146..502 FT /gene="AV2" FT CDS 146..502 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:E3UU87" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E3UU87" FT /protein_id="ADP09638.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPVSEPCCCPHCPRHQIKSMGEQAHEQ FT KAQDVQDVQKSGCA" FT gene 306..1076 FT /gene="AV1" FT CDS 306..1076 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:E3UU88" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E3UU88" FT /protein_id="ADP09639.1" FT /translation="MSKRPADIIISTPVSKVRRRLNFDSPYQSRVAAPIVRVTKSKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVRKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1073..1477) FT /gene="AC3" FT CDS complement(1073..1477) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:E3UU89" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E3UU89" FT /protein_id="ADP09640.1" FT /translation="MDSRTGEPITAAQAENGVFIWEIQNPLYFKILEHHNRPFLMNQDI FT ITIRIQFNHNLRRALGVHKCFLVYRIWMTSQTQTGRFLRVFKTQVVKYLDHLGIISINN FT VNRAVDHVLWNVIQHIVYVEQSYSIIFNVY" FT gene complement(1218..1622) FT /gene="AC2" FT CDS complement(1218..1622) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:E3UU90" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E3UU90" FT /protein_id="ADP09641.1" FT /translation="MQPSSPSKAHSTQVPIKVQHRIAKKGIRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREWRVYLGDSKSPLFQDIRAPQPSISHEPRHHHNPNPVQPQP FT EESSGSAQVFSSLPNLDDLTDSDWAFLKGL" FT gene complement(1525..2610) FT /gene="AC1" FT CDS complement(1525..2610) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:E3UU91" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E3UU91" FT /protein_id="ADP09642.1" FT /translation="MPRTQSFCVNAKNIFLTYPKCPISKEQMLEILKSINCPSDKLFIR FT VSQEKHQDGSLHIHSLIQFKGKSKFRNPRHFDVTHPNNATQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGRFQVDGRSARGGQQAANDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPCCSSSFDQVPVELEEWRSENVVGAAARPMRPMSIVIEGA FT SRTGKTMWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSHQSATQDSQEGDQETTS" FT gene complement(2196..2453) FT /gene="AC4" FT CDS complement(2196..2453) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E3UU92" FT /protein_id="ADP09643.1" FT /translation="MGACISTRSSSSKVNPSSETLDISMSLTLITPPNSTQTSRELSPA FT PMSSHTSRRTVITSTGVGFRSMEDLLEEVNRQLTMLPQRP" XX SQ Sequence 2752 BP; 754 A; 569 C; 625 G; 804 T; 0 other; accggatggc cgcgattttt tttacagtgg tccccccaca cgcactaacg gacatttaca 60 cgtggaccaa tagaaagagc tccttaaagc ttagttgttt actggtcccc tatataactt 120 ggtccccaag tacgcacttc taaaaatgtg ggatccattg ttaaatgagt ttcccgaaac 180 cgttcacggt tttaggtgta tgttagcagt taaatatctg caattagtcg aaaagacgta 240 ttctcccgat acattaggtt acgatttaat tagggactta attttagtta tcagggccag 300 aaattatgtc gaagcgacca gccgatataa tcatttccac gcccgtttcg aaggtacgcc 360 gccgtctcaa cttcgacagc ccgtatcaga gccgtgttgc tgcccccatt gtccgcgtca 420 ccaaatcaaa agcatgggcg aacaggccca tgaacagaaa gcccaggatg tacaggatgt 480 acagaagtcc ggatgtgcct agaggatgtg aaggaccatg taaagtccag tcgtttgagt 540 ccagacatga cattcaacat ataggtaaag ttatgtgtat cagtgatgtc acccgtggaa 600 ctgggctgac ccatcgagtg ggtaaaaggt tttgtgttaa gtccgtctat gtcttgggta 660 agatatggat ggatgaaaat attaagacca agaatcacac gaatagtgtg atgttttttc 720 tagttcggga tcgtagacct gtggataaac ctcaagattt tggtgaggtt tttaacatgt 780 ttgataatga gcccagtact gctactgtga agaatgttca tcgtgatagg tatcaagtgc 840 ttcggaagtg gcatgcaact gtcactggtg gacagtacgc gtcgaaggaa caagctcttg 900 ttaggaagtt tgttagggtc aataattatg ttgtgtataa ccagcaagaa gctggcaagt 960 atgagaatca ttctgagaat gcgttaatgt tgtatatggc gtgtactcat gcctccaacc 1020 ctgtgtatgc tactttgaaa atacggatct atttctacga ttccgtaaca aattaataaa 1080 cgttaaatat tattgaataa gattgttcta catatacaat gtgttgtatt acattccata 1140 atacatgatc aactgcacga tttacattat taatactgat aatacctaaa tgatctaaat 1200 atttaacaac ttgagtctta aagaccctta agaaacgccc agtctgagtc tgtgaggtca 1260 tccagattcg gtagactaga aaacacttgt gcactcccag agctctcctc aggttgtggt 1320 tgaactggat tcggattgtg atgatgtctt ggttcatgag aaatggacgg ttgtggtgct 1380 ctaatatctt gaaataaagg ggattttgaa tctcccagat aaacacgcca ttctctgctt 1440 gagctgcagt gatgggttcc cctgtgcgtg aatccatagc cgtggcagcg taatgctatg 1500 aagtatgaac agccacaatc gagatcaact cgtcgtctcc tgatcccctt cttggctatc 1560 ctgtgttgca ctttgatggg aacctgagta gagtgggcct tcgagggtga tgaaggttgc 1620 attctttaaa gcccaatttt taagtgcgga gttcttttcc tcatccagga actctttata 1680 gctagagttg ggccctggat tgcagaggaa gatagtggga attccgcctt taatttgaac 1740 tggctttccg tatttcgtgt tgctttgcca gtccttttgg gcccccatga attctttaaa 1800 gtgttttaga taatgtggat caacgtcatc aatgacgttg taccacgcat cattactgaa 1860 cactttaggg ctaaggtcta agtgaccaca taggtagtta tgtggaccca acgatctagc 1920 ccacatggtt ttgcctgtcc tactagcacc ctctatcaca atactcatgg gtctcatcgg 1980 ccgcgcagcg gcaccaacca cattctccga ccgccattct tcaagttcaa ccggaacttg 2040 atcaaaagaa gaagaacaac aaggagaaac ataaacctcc acaggaggtg tgaaaatcct 2100 atctaaatta cattttaaat tatgatattg aaaaataaaa tcttttggga gtttttccct 2160 tattatcgct aacgccgctt cagccgaacc cgcatttaag gcctctgcgg cagcatcgtt 2220 agctgcctgt tgacctcctc tagcagatct tccatcgacc tgaaaccgac cccagtcgat 2280 gtaatcaccg tccttctcga tgtatgactt gacatcggag ctggacttag ctccctggaa 2340 gtttgggtgg aattgggtgg cgttattagg gtgagtgaca tcgaaatgtc tagggtttcg 2400 gaacttggat ttacctttga actggatgag cgagtggata tgcaagctcc catcttggtg 2460 tttctcctgt gatactctga taaataattt atcagaaggg cagtttatag atttgagaat 2520 ttcgagcatt tgctctttgg atattgggca ttttggataa gtgaggaaga tattcttggc 2580 attaacacaa aacgactgcg tacgaggcat attgaattgg ggacactcaa aactctatgg 2640 aatgggggac actggggacg aatatatatg gtgtccccaa atggcattcc cgtaattacg 2700 gggaaaattc caattttttc ccgctccaaa aagcggccat ccgtataata tt 2752 //