ID HM461863; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC HM461863; XX DT 21-OCT-2010 (Rel. 106, Created) DT 04-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus clone tomF2 segment A, complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RX DOI; 10.1007/s00705-013-1613-y. RX PUBMED; 23361863. RA Kumar J., Gunapati S., Singh S.P., Kumar A., Lalit A., Sharma N.C., RA Puranik R., Tuli R.; RT "A new betasatellite associated with cotton leaf curl Burewala virus RT infecting tomato in India: influence on symptoms and viral accumulation"; RL Arch. Virol. 158(6):1349-1353(2013). XX RN [2] RP 1-2759 RA Kumar J., Kumar A.; RT "Cotton leaf curl Burewala virus infecting tomato"; RL Unpublished. XX RN [3] RP 1-2759 RA Kumar J., Kumar A.; RT ; RL Submitted (07-JUN-2010) to the INSDC. RL Molecular Virology Lab, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, Uttar Pradesh 226001, India XX DR MD5; 1f09e70677e39c38af3830694c16a614. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /segment="A" FT /host="tomato" FT /isolate="Bihar" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaf tissue" FT /clone="tomF2" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="AV2" FT CDS 132..488 FT /codon_start=1 FT /gene="AV2" FT /product="movement/precoat protein" FT /db_xref="GOA:E3ULX7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E3ULX7" FT /protein_id="ADO41096.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKIMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene 292..1062 FT /gene="AV1" FT CDS 292..1062 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C7E441" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C7E441" FT /protein_id="ADO41097.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKSWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="AC3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E3ULY5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E3ULY5" FT /protein_id="ADO41098.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNNY" FT gene complement(1204..1608) FT /gene="AC2" FT CDS complement(1204..1608) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E3ULY6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E3ULY6" FT /protein_id="ADO41099.1" FT /translation="MQSSSLSKDHCTQLPIKVQHREAKRRNRRRIVDLECGCSLYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGSSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQSQP FT EESVGDTQMFHSFPNLDDLTASDWSFLKGL" FT gene complement(1505..2596) FT /gene="AC1" FT CDS complement(1505..2596) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:D3HIR9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D3HIR9" FT /protein_id="ADO41100.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYNEFLNEEKNTALKNWTLKNAIFITLEGPL FT YSASNQSTAQGSEETQQEEDSRS" FT gene complement(2137..2439) FT /gene="AC4" FT CDS complement(2137..2439) FT /codon_start=1 FT /gene="AC4" FT /product="regulatory protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E3ULY8" FT /protein_id="ADO41101.1" FT /translation="MGALISMCSSSSRANSSARITDSSTWYPQPGQHISIRTFRELNQA FT QMSRPTSTRTGTLSSGESFRLMEDQQEEDSRQPTTLTPQHLTQAVSQRLLESLRN" XX SQ Sequence 2759 BP; 720 A; 544 C; 650 G; 845 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcgtattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaatca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataattatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataca aagaacaccc 1500 acattcaaga tctactatcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggtcc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc attataactg ctgttcggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctatct agatttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag 2160 cctctgactt actgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctgctgtc 2220 ctcctcttgc tgatcttcca tcaatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgacct ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc 2400 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga 2460 gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct 2520 ctttagtgag tgagcactgt ggataagtga tgaaatagtt tttggcttgt actttaaaac 2580 gtttgggggg agccattgac tttggtcaat tagagacaac tgatgggctt ttactctggg 2640 aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2700 agttcgtttg aaattcaaat tcccctttgg ggtccaaaag cggccatccg tataatatt 2759 //