ID HE806445; SV 1; circular; genomic DNA; STD; VRL; 2567 BP. XX AC HE806445; XX DT 26-OCT-2012 (Rel. 114, Created) DT 26-SEP-2014 (Rel. 122, Last updated, Version 2) XX DE Sida golden mosaic Liguanea virus segment DNA-B isolate 05B_1_C1209 DE complete sequence XX KW complete viral segment. XX OS Sida golden mosaic Liguanea virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2567 RA Jeske H.; RT ; RL Submitted (02-MAY-2012) to the INSDC. RL Molecular biology and virology of plants, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, D-70550, GERMANY. XX RN [2] RX DOI; 10.1007/s11262-014-1090-8. RX PUBMED; 24943118. RA Jeske H., Kober S., Schafer B., Strohmeier S.; RT "Circomics of Cuban geminiviruses reveals the first alpha-satellite DNA in RT the Caribbean"; RL Virus Genes 49(2):312-324(2014). XX DR MD5; 9929ab7813465077a7083d3b8ed708d4. XX FH Key Location/Qualifiers FH FT source 1..2567 FT /organism="Sida golden mosaic Liguanea virus" FT /segment="DNA-B" FT /host="Sida spp." FT /isolate="05B_1_C1209" FT /mol_type="genomic DNA" FT /country="Cuba:Trinidad" FT /collection_date="Aug-2007" FT /db_xref="taxon:1188810" FT CDS 384..1154 FT /transl_table=1 FT /gene="BV1" FT /product="NSP" FT /note="nuclear shuttle protein" FT /db_xref="GOA:K4QC16" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:K4QC16" FT /protein_id="CCH63333.1" FT /translation="MSPWRGKRGYNFNYRRVKPRNTLFNRSTVSKRHDMKRGGGNYMKS FT TDEPKLAAQVIHENQYGPEFVMAHNSAISTFISYPNMGNIKPNRVRSYIKLKRLRFKGT FT VKIERVQSDLHMDGSIPKVEGVFSLVVVVDRKPHLGASGGLHSFDELFGARIHSHGNLN FT ITPSLKDRFYIKHVFKRVLSVEKDTLMIDVEGSTTLSNKRFSIWGRFKDLERDSCNGVY FT DNISQNALLVYYCWMSDAASKASSFVSFDLDYVG" FT CDS complement(1206..2087) FT /transl_table=1 FT /gene="BC1" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:K4Q764" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:K4Q764" FT /protein_id="CCH63334.1" FT /translation="MDSQLAYPPSAFNYIESHRDEYQLCHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWARKPIRCASMSRLGSRGPIEIRPGESWASRSTIGTAQSDVD FT SEIENELHPYRHLSRLGPSVMDPGESASVVGAQRAESNITMSLGQLNELVRTTVQECIN FT SNCKASQPKTLQ" XX SQ Sequence 2567 BP; 656 A; 547 C; 580 G; 784 T; 0 other; accggatggc cgcgctttgg tgaccacttc ctgtccgctc acgcgccccc ccctggtgct 60 accctctcac gcgctctccc attggtgctg gtgcccctct cttttttttg ggtggccttt 120 aatttgaatt aaaggttaat gctttagtcg cgcgattgga cctggtgtgg aattattgtc 180 tcgcgacgac taaataggac ccactctacc tgatggtaga cgtggctaaa tttctaccat 240 gctgctgagt ctatttaacc tatttctaat tgaccttact atttaagtgg gacacttaaa 300 tatgatagcc tacttgcctc agctgtgcac cacgtttaca ttgttagctc taatcgtgtt 360 ttattttggt ctattctcag gtcatgtctc catggagggg taaacgtggt tataatttta 420 attaccgacg agttaagcca cgtaacactt tgttcaaccg ttcaaccgtg tcaaaacgac 480 atgatatgaa acgtggagga ggtaattata tgaagtcaac tgatgagccc aagttagcag 540 cccaagtcat acatgagaat caatatgggc ctgaatttgt aatggcccat aattcagcca 600 tatccacgtt catcagttat ccaaacatgg gaaatatcaa acctaaccga gtccgttctt 660 atattaagtt gaaacgactc cgtttcaaag ggactgtgaa gattgaacgg gttcaatcgg 720 atttgcacat ggatgggtct attccgaaag tcgaaggagt cttttctctt gttgtggttg 780 tggatcgaaa accccacttg ggtgcatctg gtggtctaca ttccttcgac gagctgtttg 840 gtgcaaggat ccacagccat ggtaacctga acataactcc atctttgaaa gaccgcttct 900 atatcaaaca cgtgttcaaa cgtgttttgt ccgttgagaa ggatacgctc atgatcgacg 960 tggaaggatc tacaactctc tctaacaagc gttttagtat ttggggccgg tttaaagacc 1020 tcgaacgtga ttcatgtaac ggtgtatatg acaatatcag ccagaacgcc ttgttagtgt 1080 attattgttg gatgtcagat gctgcgtcta aggcatcttc atttgtatct tttgatctcg 1140 actatgtcgg gtaattaatg gagaatacat tcgactcaca agcattcaac aataatatta 1200 aaactctatt gcaatgtttt gggctgagaa gccttacaat tactattgat acattcttgg 1260 accgttgtcc taactagctc gtttaattgg cccaaagaca ttgtaatgtt ggattccgct 1320 ctctgggctc ccactaccga cgcagactct cctgggtcca taacactggg cccaagccta 1380 ctcaggtgtc tgtacgggtg gagttcgttt tctatttctg agtccacatc tgattgggcc 1440 gtacctatgg tactcctgga agcccaagac tcaccaggcc ttatttcgat tgggcctcta 1500 gacccaagcc ttgacatcga tgcacatctt atgggcttcc ttgcccattt cccatagtcc 1560 acatgtgaga agtcgacatc tttgtctgtg aactgttttg acagtatttt aactgtcggt 1620 gcccggaagg ggatatccac ggagtgtttc gccgtcgaca atttcagctt ccctttaaac 1680 ttggcgaagt gggttcgctg gtgaacattg gtatctgaaa ctctgtaata gagtttccat 1740 ggaattgggt ctttgagaga gaagaaggaa gctgagaaat agtggagatc tatgttgcat 1800 ctgatcggaa aagtccacga cgcctgtaat gattcattgt ctgtcatcct cttgtcgtga 1860 atctccacta tcaccgtccc agttgcgtta atcggtacct gctgcctgta ttctatgacg 1920 cagtggtcga ttttcatgca gctacgactg agtctcgccg tcaactggga cgccgtcgac 1980 ggaaattgca ggattatctc agttaggtca tggcagagct gatattcgtc tctgtgagac 2040 tctatgtagt tgaaggcact tggaggatat gctaactgag aatccatcta atgaatcaag 2100 gccgcgcagc ggctgtgcaa gtgaattatg aattggggaa taaaaattta gggtttttga 2160 atatgaacag tatatgaact ccgcatgaac ttgcaagaat ttctgggaaa tccagtatgt 2220 aaagaagaac ttgaagaaca atcgcttaat ttttcccgaa aattaggtac aggctttgta 2280 tcgtcccaga aattgaaagc gttttgaaaa agtgtgagaa atgttcaaag aactcgatgt 2340 gtgtaatggg ttatatctgg gtttcataag ttatatctgt ttatgtttat atagaaaccc 2400 agagtttttg ttagtcagtg gcatttttgt aatatgaggg tgttccccaa ttgaggctct 2460 ctcaaacttg ctcattcaat tggggaaacg gggaacaatt tatactagaa ccctcaatag 2520 aactttcaat cgtgttcgca cacgtggcgg ccatccgcta taatatt 2567 //