ID HE793427; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC HE793427; XX DT 15-MAR-2013 (Rel. 116, Created) DT 07-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Okra leaf curl Cameroon virus complete sequence, isolate Lik1:GR17 XX KW complete genome. XX OS Okra leaf curl Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RA Naeem Sattar M.N.; RT ; RL Submitted (15-MAR-2012) to the INSDC. RL Naeem Sattar M.N., Plant Biology and Forest Genetics, Swedish University of RL Agricultural Sciences, Box 7080, 750 07, SWEDEN. XX RN [2] RX DOI; 10.1016/j.virusres.2013.03.010. RX PUBMED; 23535770. RA Leke W.N., Sattar M.N., Ngane E.B., Ngeve J.M., Kvarnheden A., Brown J.K.; RT "Molecular characterization of begomoviruses and DNA satellites associated RT with okra leaf curl disease in Cameroon"; RL Virus Res. 174(1-2):116-125(2013). XX DR MD5; 80dbb18f07ae1445b586749cde92882e. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Okra leaf curl Cameroon virus" FT /host="Abelmoschus esculentus" FT /strain="Cameroon" FT /isolate="Lik1:GR17" FT /mol_type="genomic DNA" FT /country="Cameroon:Likomba, Southwestern Cameroon" FT /collection_date="Dec-2007" FT /db_xref="taxon:912034" FT CDS 76..513 FT /gene="V2" FT /product="Pre-coat protein" FT /db_xref="GOA:E5AZU6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E5AZU6" FT /protein_id="CCG85208.1" FT /translation="MLSNQNARSTHYNLKFEIYTCSLSLSGITMWDPLVNEFPESVHGF FT RCMLAIKYLQALEDTYEPNTLGSDLIRDLISVIRAKNYVEATRRYNYFHARLEGSSKAE FT LRQPLYEPCSCPHCPRHKQTSVMDLPANVQKAQNVPDVQKP" FT CDS 323..1099 FT /gene="V1" FT /product="Coat protein" FT /db_xref="GOA:E5AZU7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E5AZU7" FT /protein_id="CCG85209.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPTVLGTSKRRSW FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVTHTGNSRCLSDVTRGNGLTH FT RTGKRFVIKSVYILGKVWMDENVKKSNHTNTCMFWLVRDRRPYGNSPQDFGQVFNMFDN FT EPSTATVMNDKRDRYQVLKRFQATVTGGPSGCKESAIVRRFFRINHHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYASLKIRMYFYDSVSN" FT CDS complement(1096..1497) FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:E5AZU8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E5AZU8" FT /protein_id="CCG85210.1" FT /translation="MDSRTGELITARQTENGVLIWTINNPLYFKTIKEIPLTHGNQTMV FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKCLYRLGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT CDS complement(1241..1645) FT /gene="C2" FT /product="transcriptional associated protein" FT /db_xref="GOA:E5AZU9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E5AZU9" FT /protein_id="CCG85211.1" FT /translation="MRPSSPSHIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPIFQNHQGDSSNARESNNGRDADKIQLQP FT QEGIGDSQMFHELQGLDDLTPPDWSFLKRI" FT CDS complement(1545..2633) FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:E5AZV0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E5AZV0" FT /protein_id="CCG85212.1" FT /translation="MAPNKRFQIYAKNFFLTSPKCSLSKEEALEQLQQISTASNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKTEALRVIRELAPKDFVLQYH FT NLINNLDRIFQEPPAPYVCPFLSSSFDQVPEELEEWAAENVVEAAARPGRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKDYLEEEKNAHLKSWALKNATFITLSYPL FT YSGTNQSPASGGQEESNQETQD" FT CDS complement(2183..2476) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E5AZV1" FT /protein_id="CCG85213.1" FT /translation="MANLICMCFSNSKGNSSAKIRDYSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHSNGENSRSTDDLPEEANRQPMTLTPQRLTQGVRQRLLGL" XX SQ Sequence 2764 BP; 720 A; 590 C; 612 G; 842 T; 0 other; accggtgggc gcgaaaaaaa aaagtggtcc ccgccccacg tgaacatgtc gcgcgagtgc 60 tgaacatgtc gcgcgatgct gtccaatcag aacgcgcgct ctacgcatta taatttgaaa 120 tttgaaatat atacttgctc cctaagtttg tccggcataa ctatgtggga tccgttagtg 180 aacgagttcc ccgaatctgt gcatgggttt cgttgtatgc ttgcaataaa atatttgcag 240 gctttagagg atacttacga gcccaacacg ttggggtctg atttaattag agatttaata 300 tctgtgatta gagcgaagaa ttatgtcgaa gcgaccagga gatataatta tttccacgcc 360 cgtctcgaag gttcgtcgaa ggctgaactt cgacagccct tatacgagcc gtgcagctgt 420 ccccactgtc ctaggcacaa gcaaacgtcg gtcatggact taccggccaa tgtacagaaa 480 gcccagaatg taccggatgt acaaaagccc tgatgttcct cgaggatgtg aaggtccatg 540 taagatccaa tcattcgatc aacgtgactc agtaacccat acaggtaatt caagatgtct 600 aagtgatgtc acaagaggta atgggcttac tcatcgtaca ggtaaacgtt ttgttatcaa 660 gtctgtttac atattaggta aggtttggat ggacgagaat gttaagaagt ccaatcacac 720 aaacacgtgt atgttctggt tagttagaga tagacgtcca tatggtaata gccctcaaga 780 ttttggacag gtatttaata tgtttgataa tgagcccagc actgcaacgg ttatgaacga 840 caagcgtgat cgttaccagg ttttaaagag gtttcaagca accgtcactg gaggaccttc 900 cggttgcaaa gagtctgcta ttgttaggcg ttttttcagg ataaaccatc atgtcactta 960 caatcatcag gaagctgcca aatatgagaa tcatacggag aatgctttac tattgtatat 1020 ggcatgtacc catgcgtcaa accctgtgta tgctagtctt aaaatacgaa tgtatttcta 1080 cgattcagtt tcgaattaat ataattttat ttgaatattg tgtgtgaatt cacttgccac 1140 tgttgtttgc aatacatcgt acaaaacatg attgactgct ctaattacat tgttaattga 1200 aattacacct aatctataca aacatttcat aatctgtttc ctaaatacgt ttaagaaaag 1260 accagtcggg gggcgtgaga tcgtccagac cctgaagttc atgaaacatt tgtgaatccc 1320 caattccttc ctgaggttgt agttgaatct tatctgcatc tctaccattg tttgattccc 1380 gtgcgttaga ggaatctcct tgatggtttt gaaatatagg ggattgttga ttgtccagat 1440 aagtacgcca ttctctgtct gacgcgcagt gatgagttcc cctgtgcgtg aatccattgt 1500 ctctgcacgt gaaggctacg tatactgtgc aaccacaagg gatgtcaatc ctgcgtctcc 1560 tgattgctct cttcttggcc tcccgatgct ggactttgat tggtacctga gtacagcgga 1620 tatgagaggg tgatgaaggt cgcattcttt aatgcccagg atttgagatg tgcgttcttc 1680 tcctcttcta aatagtcttt ataggatgaa tttggacctg gattgcagag gaagattgtt 1740 gggatgcccc ctttaatttg aactggcttc ccgtattttg tgttgctttg ccagtccttt 1800 tgtgcaccca tgaactcctt aaagtgtttc agataatgcg ggtcaacatc atctatgacg 1860 ttataccatg cgtcattact gaacaccttt gggctcagat caagatggcc gcacagataa 1920 ttatgaggcc caagacttct ggcccatacg gtctttcctg ttctgctttc cccttcaatt 1980 actatactaa tcggtctacc tggccgcgca gcggcctcca cgacgttctc cgccgcccat 2040 tcttcaagtt cttctggaac ttggtcgaac gaagaagaca aaaaaggaca aacataagga 2100 gctggaggct cctgaaaaat cctatctaaa ttattaatta aattatgata ttgtaaaaca 2160 aaatctttgg gagctaactc ccttataacc ctaagagcct ctgtcttact ccctgcgtta 2220 agcgctgcgg cgtaagcgtc attggctgtc tgttggcctc ctctggcaga tcgtccgtcg 2280 atctggaatt ctccccattc gagtgtgtct ccatccttgt cgatgtagga cttgacgtcg 2340 gagctggatt tagctccctg aatgtttgga tggaaatgtg ctgacctatt tggggagacc 2400 aggtcgaata gtctctgatt ttggcacttg aatttccctt cgaattggag aagcacatgc 2460 agatgaggtt ggccatcctc gtgaagttct ctgcaaatct tgatgtattt cttgtttgat 2520 gctgtactta tttgctggag ttgctctagg gcttcctctt tgcttagaga acattttggg 2580 gaagttagga aaaaattctt tgcatatatt tggaatctct tgttaggagc cattgacttg 2640 gtcaatcggt actcagatgc ttctccctag tatatcggta ctcaatatat agtgagtacc 2700 aaatggcatt ttggtaaaaa tcccaataat tttgaacccc catagcgccc accgttataa 2760 tatt 2764 //