ID HE717021; SV 1; linear; genomic RNA; STD; VRL; 3765 BP. XX AC HE717021; XX DT 14-MAR-2012 (Rel. 112, Created) DT 28-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Clitocybe odora virus complete genome, isolate C-Holm XX KW complete genome. XX OS Clitocybe odora virus OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-3765 RA Willingmann P.; RT ; RL Submitted (06-MAR-2012) to the INSDC. RL Biozentrum Klein-Flottbeck und, Botanischer Garten, Phytomedizin, RL Ohnhorststrasse 18, Hamburg, Hamburg 22609, GERMANY. XX RN [2] RA Heinze C.; RT "A novel mycovirus from Clitocybe odora"; RL Arch. Virol. 0:0(2012). XX DR MD5; 50ca37048fbd94acf822f6d4f0c31ad8. XX FH Key Location/Qualifiers FH FT source 1..3765 FT /organism="Clitocybe odora virus" FT /host="Clitocybe odora" FT /isolate="C-Holm" FT /mol_type="genomic RNA" FT /isolation_source="host fruiting body" FT /collection_date="07-Sep-2010" FT /db_xref="taxon:1162083" FT CDS join(305..3037,3041..3718) FT /transl_table=4 FT /ribosomal_slippage FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /note="putative CP domain detected" FT /db_xref="GOA:H8XBW0" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:H8XBW0" FT /protein_id="CCG47524.1" FT /translation="MIHTLLWIHIMVSFDHLLIRKPGPSHQTLLQVESNTKNMKNISQL FT LDQKFRFRSFSLGVLSAKAIRNNSLSMVGMVLRLIPTMQGKLTPAIAKDTKSILSQFSR FT IAKCQGIVGLVKYLKACSVLTQQSISGFKVDNFSPRVSRTNSGIPRILPVHCRRMIRQG FT HLVYMRLSLTIFSLFRVMRYPGKMKISTITAPYSGTEQMIRIVTKDIPRFVRLFCPSAG FT RSLIGRFSYVVINKSSPMALRGIASTHPTSLIRAALAFTPKQVESLELLARASHPESQV FT VITPEGIKEPPTPLPGVMVFINRIRKSVIPSLFGLGINTPSHTGKLGLKEEAAGKVRVF FT AMVDPWSQMILRPFHLGLFKILRRIRMDGTFNQLKPLERAWGFKSLYSMDLSSATDRLP FT MRIQVPLIQQLFKLTNAEAEAWRSLLVDRPYYCPPLNTSVMYSVGQPMGALSSWAMLAM FT THHLIVQVAAWRSGFDKKKLFRAYAVLGDDIVIFDKKVAKYYHRVLTGLGVECNLAKSI FT MSHRGIGLEFAKKTFFQGFNVSPSPLTEVLAALKDPIALLQYGKIYGLKFVDLLTVAGF FT GFRVKSRAHLPYWRQPNKKVRYLLICQMMQAGNLKELFSRSMGSKVGSPLLASTLSSYV FT SGTLNDLFNQYFKNIRVASALDANTLSEATTYPRLYYDLFWLIYHPFVFNYKILNTRGM FT ALTQTLHHSFRPVKEGVDEAIFDLVERLKSLFTIESMVSSLSLDITKMRRGGDEVPVRV FT PAPKALRIQNAWKVVFEAFVKKTDPITEKIDQVDVLERSLFPLALISRVFFKSVPKSTI FT GKLRTMRIARTPFPADLVKSFGYRTLFWFLSGEVIAAFITTSLLYYIGAISIVILDHLW FT LHNGDLHSLLPLLLVPFGPLIELVKVSFFAALSYFGLAPATIPVSVKILVVTFIGHLGY FT ALTALLHHWDWIVAVYSDFHWNHGGAESIWQMIQFSFGTYYELVLVPLAGFVSSIIKSA FT YSLSWSYIKESVFWADICWGQNAISYWLWDSFTFLYGYQDYTVTDFRWNVEDQYLPDIP FT EDPETPQEDDASDTDTITGHEWDGPSHYDWTNQDDGFLIIEPVPTEPWYVRLSQYYVSN FT AFLISPIIGLIVVPTVKWLLLPASTLIVG" XX SQ Sequence 3765 BP; 998 A; 801 C; 811 G; 1155 T; 0 other; ctgtaccttc acaggttcag ttaagacgaa atctcgtctt tctctcctca attggagttc 60 tatctttagt tcttcttctg agagggtccc ccagtcttgg gtaattaggt agttacatcc 120 taattacttc ggccgggagt taggtcaagt cttttgattt gatattgcct cctaaaccga 180 gtgacacccg ccatccttcc aaaggtagcc gcagccccca cctaggggaa actgtaggat 240 agtctctaga gggaagtgac gaatggtcgt cggcctggtt tagtaacata caaatcagag 300 tcccatgata cataccctgt tatggattca tattatggtc tcttttgatc acttattaat 360 ccggaaaccg ggtccgagtc accaaactct tcttcaagtt gaatctaata ctaagaatat 420 gaaaaacata tctcaattat tggaccagaa gtttcgtttc cgaagcttct cacttggagt 480 tctatctgct aaggctatta gaaataatag cttaagtatg gttggaatgg tcttacgact 540 tattccgacc atgcaaggga aactgactcc ggccattgca aaagatacca aaagtatcct 600 ttctcaattt tctcgaattg ctaagtgcca agggatcgtt gggttagtga aatacttaaa 660 ggcctgttct gtgttaacac agcagtccat ctctggtttt aaagttgata acttttcacc 720 cagggtaagt agaactaact ccgggatccc tcggattctt cctgttcatt gtagacgtat 780 gatacgtcag gggcatctcg tttatatgag actctctctg acaatcttct ccttgttccg 840 tgtaatgcgg tatccaggga aaatgaaaat atctacaata acagctccgt actcaggtac 900 agaacagatg attcgtattg taactaagga tattcctcgg ttcgtacgac tcttctgtcc 960 gtcggctgga agatctttaa tcggacgttt ttcctacgtc gtgattaata aatcttctcc 1020 gatggccctg agaggaattg cgtctactca tcctacttca ttgattcgag ctgctttggc 1080 ttttacgcca aaacaggtcg agtcacttga gcttctagcg agagctagcc atcctgaatc 1140 tcaggtggtt atcactccag aaggtattaa ggaacctcct actcccttac caggagttat 1200 ggtgttcatt aacagaatta ggaagagcgt aattccttcc ttgtttggtt tagggattaa 1260 taccccttct catacaggga aactcggctt gaaggaagaa gctgcgggaa aggtgcgagt 1320 tttcgctatg gtagatcctt ggtctcagat gatcttgcgg ccattccatt tgggactttt 1380 taaaatttta agaagaatcc gaatggatgg tacgtttaat caacttaaac cattggaaag 1440 agcatggggt tttaaatccc tatactctat ggatctatcc tctgccaccg accgtctacc 1500 aatgagaatc caagtacctc taattcagca gctgtttaaa ttaacaaacg ctgaagctga 1560 ggcctggaga tctctactag tagaccgacc ctattattgt cctccactga acacatcggt 1620 gatgtattcg gtgggtcaac caatgggggc gttatcgtcg tgggcgatgt tagcaatgac 1680 tcatcacctc atcgtgcaag tagcagcatg gcgatctgga tttgataaga agaaactgtt 1740 ccgagcctac gccgttctcg gtgatgatat agtgatcttc gataagaagg ttgcaaaata 1800 ttatcacagg gtattgactg ggcttggggt agagtgtaat ctagctaaat ctatcatgtc 1860 ccatagaggg attggattag aattcgcaaa gaaaacattc ttccaaggtt tcaacgtatc 1920 accctcacct cttacagagg tgttagccgc tctgaaagac cctatcgcac tcctacagta 1980 tggaaaaatt tacggactta agttcgtaga ccttctaact gtagcaggtt tcgggttccg 2040 cgtgaaatct cgtgctcatc tgccttactg gagacaacct aacaaaaaag ttagatatct 2100 tctgatatgt cagatgatgc aagcgggaaa tctaaaggaa ctcttttccc gatccatggg 2160 atccaaggtt ggttcgccac ttctggcttc caccttgtca tcctatgtat ctggaactct 2220 taacgaccta ttcaaccaat atttcaaaaa tattagggtt gcctcggcgt tagatgcgaa 2280 tactctttct gaggctacta cttatcctcg gttatattat gatctgttct ggttgatata 2340 ccatcctttt gtatttaatt ataaaatatt aaacactcga ggaatggcgt taacccaaac 2400 tcttcatcat agtttccgac cggttaagga gggggtggat gaagccattt ttgatcttgt 2460 ggagagacta aagtctctat tcacaatcga aagcatggta tcgtccctat ccctggatat 2520 tactaaaatg cgacgtggcg gtgacgaggt tccggtaaga gtaccggccc ccaaagcgct 2580 acgtatccaa aacgcatgga aggtagtatt cgaggccttc gtaaagaaga cagatcccat 2640 caccgagaaa attgatcaag tagacgtttt agaacgttca ctctttcctt tagctctgat 2700 tagtagggtc ttcttcaagt cggtcccaaa gtcaactatt ggtaagttga gaacaatgag 2760 aattgctcga acaccgtttc cagcagactt ggtaaagtct tttggttata gaaccctatt 2820 ttggtttcta agtggtgaag taattgcggc gtttattacg acgtcattac tgtactatat 2880 cggagcaatt tccatagtga tcctagatca tctttggtta cacaatggtg atttacactc 2940 gctcttgcca ctattattgg ttccatttgg tccactaata gagttggtca aggtgagttt 3000 ctttgctgcc ttatcctatt tcggattggc acctgcttga actattcctg tctcagtgaa 3060 gattctagtt gtgaccttta tcggtcacct agggtatgca ttaactgcat tacttcatca 3120 ttgggattgg atagtagctg tgtattctga ttttcattgg aatcacggag gagcagagtc 3180 tatatggcag atgattcaat ttagctttgg gacatactat gaattagtat tagttccact 3240 agctggattt gtttcatcaa tcataaagtc agcgtactca ctcagctggt cctacattaa 3300 agaatctgtc ttttgggcag atatatgttg gggtcaaaat gctatctcct attggttatg 3360 ggattccttt actttccttt acgggtatca ggactacaca gtcactgatt tccgatggaa 3420 tgtagaggac cagtaccttc cggatattcc ggaagatcct gaaacccccc aagaggatga 3480 cgcatccgac accgacacta taaccggaca tgaatgggat ggtcctagtc attatgactg 3540 gactaaccag gatgacggtt tcttaatcat agaaccagta ccaaccgaac catggtatgt 3600 tcgattaagt cagtattacg taagtaatgc attcttgatt tcacctatta ttggtttgat 3660 cgtagttccc actgtgaagt ggttactact tcctgcttct actttgatag tagggtagga 3720 ggcttggacg atctaatacg ttaataagca atggtcgcag tcgga 3765 //