ID GU112068; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC GU112068; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Bhendi yellow vein mosaic virus [India:Raichur:OY54B:2005] segment DNA-A, DE complete sequence. XX KW . XX OS Bhendi yellow vein mosaic virus [India:Raichur:OY54B:2005] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RX DOI; 10.1007/s11262-012-0732-y. RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (01-OCT-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX DR MD5; 9ef2c6cb0a3889bf6049bb5f8a24e85b. DR EuropePMC; PMC3824786; 28324417. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Bhendi yellow vein mosaic virus FT [India:Raichur:OY54B:2005]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY54B" FT /mol_type="genomic DNA" FT /country="India:Raichur, Karnataka" FT /isolation_source="leaf" FT /collected_by="V.Venkataravanappa" FT /collection_date="2005" FT /db_xref="taxon:908107" FT gene 121..486 FT /gene="AV2" FT CDS 121..486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BPT0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BPT0" FT /protein_id="ADO40954.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BPT1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BPT1" FT /protein_id="ADO40955.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629..985) FT /gene="AC5" FT CDS complement(629..985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="GOA:E7BPT2" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:E7BPT2" FT /protein_id="ADO40956.1" FT /translation="MGTSHIKHQRILRMILIFSCLLLVVNNIIVNPNKFLNQRLFLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1054..1458) FT /gene="AC3" FT CDS complement(1054..1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BPT3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BPT3" FT /protein_id="ADO40957.1" FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITLRIHFNYHLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1151..1603) FT /gene="AC2" FT CDS complement(1151..1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BPT4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BPT4" FT /protein_id="ADO40958.1" FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLPP FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSLN" FT gene complement(1500..2588) FT /gene="AC1" FT CDS complement(1500..2588) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BPT5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BPT5" FT /protein_id="ADO40959.1" FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIKI FT CRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFHN FT LNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGDS FT RTGKTMWARSLGPHNFLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY FT SGTNQSTTQGSEETHQEEESRS" FT gene complement(2132..2434) FT /gene="AC4" FT CDS complement(2132..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BPT6" FT /protein_id="ADO40960.1" FT /translation="MGNLIFTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2742 BP; 731 A; 543 C; 654 G; 814 T; 0 other; accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgact atgcagactc 60 aaagcttaga taacgctcct tcggctataa gtacgtgcgc actaagtttc aattcaaaaa 120 atgtgggatc cactattaaa tgaatttccg gatacggttc acgggtttcg ttgtatgcta 180 tctgtaaaat atttgcaact tttgtcgcag gattattctc cagatacgct tgggtacgag 240 ttaatacggg atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga 300 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg gcagcccata 360 caccagccgt gctgctgccc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag 420 gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg 480 atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatatcg ttcatattgg 540 taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 600 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg agaacatcaa 660 gaccaagaac catacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccgacaga 720 taaaccacaa gattttggtg aagtatttaa tatgtttgat aacgagccca gtacggcgac 780 cgtgaagaac atgcataggg atcggtacca ggtgttgagg aaatggcatg caaccgttac 840 tggtggacaa tatgcgagta aggaacaggc gttggttaag aaatttgtta gggttaacaa 900 ttatgttgtt tacaaccagc aggaggcagg aaaatatgag aatcatacgg agaatgcgtt 960 gatgctttat atggcttgta cccatgctag caacccagtt tatgctacgc tgaagattag 1020 gatatatttt tatgactctg taacgaattg aaattaataa agattgaatt ttatatctga 1080 atattggtct acatacattg tttgattaat tacattgtac aagacatgtt cgacggcttt 1140 aataactaag ttaattgaga ctacaccgag attgttgaga tatttgagga cttgggtttt 1200 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc ggaaggttag 1260 aaaacacttg tgtattccca gagctttccg taggtggtag ttgaaatgga tcctgagtgt 1320 tattatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ttgaggatct tgaaatagag 1380 gggatttgga accttccaga tatagacgcc attctttgct tgagctgcag tgatgcgtgc 1440 ccctgtgcga gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt 1500 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgttgt actttgattg 1560 gtacccgagt acaacggttc ggtgagaaag acgaatgctg cattttttaa agcccacgct 1620 ttcaaagctg agttcttttc ctcgtccaag aattctttat agcttgcgtt ggggcctgga 1680 ttgcagagga agattgttgg aatgccgcct ttaatttgaa ccggcttccc gtatttggtg 1740 tttgattgcc agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg 1800 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg gcttagatct 1860 aggtgaccac acaaaaagtt atgtgggcct agtgacctag cccacatagt tttgcccgta 1920 cgactatctc cctctaagac taaactcaaa ggtctcagag gccgcgcagc ggcgtccatg 1980 acgttttccg atacccattc ctcaagttct tctggaactt gatcgaaaga agaagataaa 2040 aaaggagaaa cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa 2100 ttatgaaatt gtaagacata atccttaggt gctaactccc taatgactct aagagcctct 2160 gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt tggctgtctg ctgtccccct 2220 cttgcagatc gtccatcgat ctgaaactct ccccattcga gggtgtctcc gtccttgtcg 2280 atgtaggact tgacatctga gcttgattta gctccctgaa tgttcggatg gaaatgtact 2340 gacctgcttg gggagaccag gtcgaagaat cgctgattct ggcacttgta tttgccctcg 2400 aactggatga gcacgtgaag atgaggttcc ccatcctcgt gaagctctct gcagatcttg 2460 atgaattttt tatttgttgg ggtttgtagg ttttggagtt gggaaagtgc ttcctcttta 2520 gtaagagagc attttggata agtaaggaaa taatttttgg aatatatttg aaagcgttta 2580 gaaggcatgt tgactaaaat tgagtacccg attgactcgc tctggcaact ctctctggta 2640 tatcggtacc caatatatag tgagtaccaa atggcatatg tgtaattttg taatgaaatt 2700 caaaatcctc acgctccaaa aagcggccat ccgtataata tt 2742 //