ID GQ472984; SV 1; circular; genomic DNA; STD; VRL; 2768 BP. XX AC GQ472984; XX DT 13-MAY-2010 (Rel. 104, Created) DT 13-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Soybean mild mottle virus isolate Sb17, complete genome. XX KW . XX OS Soybean mild mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2768 RX DOI; 10.1007/s00705-010-0630-3. RX PUBMED; 20229118. RA Alabi O.J., Kumar P.L., Mgbechi-Ezeri J.U., Naidu R.A.; RT "Two new 'legumoviruses' (genus Begomovirus) naturally infecting soybean in RT Nigeria"; RL Arch. Virol. 155(5):643-656(2010). XX RN [2] RP 1-2768 RA Alabi O.J., Kumar P.L., Mgbechi-Ezeri J.U., Naidu R.A.; RT ; RL Submitted (11-AUG-2009) to the INSDC. RL Plant Pathology, Washington State University, 24106 N. Bunn Rd., Prosser, RL WA 99350, USA XX DR MD5; fcc8e8fe7eed54b31040da3c2e2bd9d2. DR EuropePMC; PMC5425491; 28243802. XX FH Key Location/Qualifiers FH FT source 1..2768 FT /organism="Soybean mild mottle virus" FT /host="soybean" FT /isolate="Sb17" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /collection_date="2007" FT /db_xref="taxon:761701" FT gene 139..507 FT /gene="V2" FT CDS 139..507 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /note="MP" FT /db_xref="GOA:D6MTV9" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:D6MTV9" FT /protein_id="ADG36409.1" FT /translation="MWDPLQNPFPHTVHGLRCMLAIKYVQLVIDTYPQDSIGEDLLRQI FT IQILRCRNHDQAEFRYSILFADVERTEKTQLRNPYGTTCTCRFCPKHVQAKSLEEPTHV FT QEAQNLQDVSFERCSKGV" FT gene 299..1072 FT /gene="V1" FT CDS 299..1072 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:D6MTW0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D6MTW0" FT /protein_id="ADG36410.1" FT /translation="MTKRSFDTAFSSPMSNVRRRLSFATPMALPAPAVSVPNTYKRRAW FT RNRPMYRKPRIYRMYRSRDVPKGCEGPCKVQSYDQRFDCKHTGSVLCVSDITRGTGLTH FT RVGKRFCIKSMMFKGKVWMDDNIKAKSHTNHVMFFLVRDRRPYGSPMDFGQVFNMFDNE FT PSTATVKQDYRDRFQVMRRWYVGVTGGQYASKEQALVNKFFYCNNYVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSISN" FT gene complement(1069..1473) FT /gene="C3" FT CDS complement(1069..1473) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer" FT /note="REn" FT /db_xref="GOA:D6MTW1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D6MTW1" FT /protein_id="ADG36413.1" FT /translation="MDSRTGELLTQSELERGVYIWEVNNPLCFKLLREDYGVMGLPYDE FT MNIRIMFNNCVKRKLEIHKCFLDLKIFLHSQSQNWRFFRAFKFLMMSFLNSIGSISILS FT VQTAINKVLLEQFVIVSHFEIKYDIKFNLY" FT gene complement(1187..1624) FT /gene="C2" FT CDS complement(1187..1624) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activator protein" FT /note="TrAP" FT /db_xref="GOA:D6MTW2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D6MTW2" FT /protein_id="ADG36412.1" FT /translation="MRSSTPSKSHCSPPNIKAQHRDAKRHRATRRRRIDCPCGCSIYVH FT LDCTDHGFSHRGVTHTIGTRAWRVYLGGEQSPLFQTPPGRLWGDGSPIRRDEHSNNVQQ FT LCQEEVGDSQMLPGFKDLSPLTESELEIFSSFQVFNDVVLE" FT gene complement(1563..2612) FT /gene="C1" FT CDS complement(1563..2612) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /note="Rep" FT /db_xref="GOA:D6MTW3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D6MTW3" FT /protein_id="ADG36411.1" FT /translation="MPRSGYFCVKAKNIFLTYPRCSLTKEEALSQLQSIQCPSNKKFIK FT IARELHENGEPHLHVLIQFEGKCQITNERHFDLTSPRRSTHFHPNIQGAKSSSDVKTYI FT DKDGDTIQWGSFQIDGRSARGGCKNANDACASALNAGSAEAALQIIKEQLPRDYVFQYH FT NVISNLNKIFTPPTTIYKSPFKVEQFNNVPEVLSQWASDNVKASAARPMRPISIVLEGE FT SRTGKTMWARSLGRHNYLCGHLDLSAKVYSNDAWYNVIDDVDPHYLKHMKEFMGSQRDW FT QSNVKYGKPTQIKGGIPTIFLCNPGPRSSYKEYMDEESNAALKEWALKNAIFYTLEEPL FT FSTEHQGST" FT gene complement(2198..2455) FT /gene="C4" FT CDS complement(2198..2455) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D6MTW4" FT /protein_id="ADG36414.1" FT /translation="MGNHISMCLSSLKESVKLRTKDTSTSLPQEGQHISIRTFRELNQV FT RTSKHTSTKTETPYNGGLSRLMVEVPEEVAKMLTTHVRRH" XX SQ Sequence 2768 BP; 730 A; 614 C; 622 G; 802 T; 0 other; acagggatgg ccgcgcccgc ccccccttta ttgtggcgcc cacatctttg atttcagcca 60 atcaggaagc agcctcaatc cttatttatc tgtttctcca ctataaactt gttgcgcaag 120 ttggtatttg aattaaagat gtgggatcct ctgcagaacc cgtttcccca taccgtacac 180 ggtcttcgat gtatgcttgc gataaagtac gtgcaattgg tgattgacac gtacccccaa 240 gacagtatag gcgaggatct attgcgccag attattcaga tattgaggtg caggaaccat 300 gaccaagcgg agtttcgata cagcattctc ttcgccgatg tcgaacgtac ggagaagact 360 cagcttcgca acccctatgg cactacctgc acctgccgtt tctgtcccaa acacgtacaa 420 gcgaagagct tggaggaacc gacccatgta caggaagccc agaatttaca ggatgtatcg 480 ttcgagagat gttccaaagg ggtgtgaagg tccttgtaag gttcagtctt acgatcagcg 540 gttcgactgt aagcacacgg gcagtgtgct gtgtgtttca gatattactc gcggaactgg 600 tcttacccat cgtgttggta agcgtttctg cataaaatcc atgatgttca aaggtaaagt 660 ctggatggac gacaacatca aggctaagag ccatacgaat cacgtaatgt ttttcttggt 720 acgtgataga aggccttatg gctcccccat ggattttggt caggtgttca acatgtttga 780 caatgagccc agtactgcta cagttaagca ggattatcga gaccgttttc aggtcatgag 840 acgatggtac gtaggagtca ccggtggtca gtatgcgtcg aaggaacagg cgttagttaa 900 taagtttttt tattgtaaca attatgttgt ttacaatcac caggaggctg gaaagtacga 960 gaaccacact gagaacgcat tgttattgta tatggcatgt actcatgcct caaatccagt 1020 gtatgcaact ctaaaaatac gggtctattt ttatgactca atcagcaatt aataaagatt 1080 gaattttata tcatatttaa tctcgaaatg ggatacaatg acgaactgct caagcaatac 1140 tttgttgata gcagtctgga cacttaaaat agaaattgaa cctatactat tcaagaacga 1200 catcattaaa aacttgaaag ctcgaaaaaa tctccagttc tgactctgtg agtggagaaa 1260 gatctttaaa tccaggaagc atttgtgaat ctccaacttc ctcttgacac agttgttgaa 1320 cattattcga atgttcatct cgtcgtatgg gagacccatc accccatagt cttcccggag 1380 gagtttgaaa cagaggggat tgttcacctc ccagatatac acgccacgct ctagttccga 1440 ttgtgtgagt aactcccctg tgcgagaatc catggtctgt gcagtcgagg tgaacgtata 1500 tagaacaccc acaaggacag tctatgcgac gccgtctagt cgccctatga cgctttgcgt 1560 ccctatgttg agccttgatg ttcggtggag aacagtggct cttcgagggt gtagaagatc 1620 gcatttttta aagcccactc cttaagcgct gcattcgact cctcatccat atattcttta 1680 taggaagatc tggggccagg attgcagagg aaaattgttg gtattccacc tttaatttga 1740 gtgggcttgc cgtacttcac gttgctttgc cagtctcttt gggaccccat gaattctttc 1800 atatgcttta gatagtgggg atctacgtca tcgatgacgt tgtaccaggc atcgtttgaa 1860 tagaccttgg cgctgagatc taaatgacca cataggtaat tgtgcctacc aaggcttctg 1920 gcccacatcg tcttccccgt cctggattca ccttccagga cgatgcttat gggtctcatc 1980 ggccgcgcag cggaagcttt cacattatct gatgcccatt gagacagaac ttccggcaca 2040 ttgttaaatt gttcaacttt aaaaggcgat ttgtaaatcg tcgttggagg cgtaaaaatc 2100 ttattgaggt tgctaataac attatgatac tgaaaaacat aatctcgtgg aagctgctct 2160 ttgatgatct gtaaagcagc ttcagcggaa ccagcattta atgccgacgc acatgcgtcg 2220 ttagcatttt tgcaacctcc tctggcactt cgaccatcaa tctggaaaga cccccattgt 2280 atggtgtctc cgtctttgtc gatgtatgtt ttgacgtccg aacttgattt agctccctga 2340 atgttcggat ggaaatgtgt tgaccttctt ggggaagtga ggtcgaagtg tctttcgttc 2400 gtaatttgac actttccttc aaactggata agcacatgga gatgtggttc cccattctcg 2460 tgtagttcac gagctatctt gatgaacttc ttgttagatg gacattgaat gctctgcaat 2520 tgtgaaagtg cttcttcttt tgtgagagaa catctgggat atgtgaggaa aatgttcttt 2580 gccttcacac aaaaataacc actccggggc atatcggtaa aagcaaatgt acccccaatt 2640 gcccccccct tctaaaactc tatacaattg ggggtaatgg gggtgaatat atacctacta 2700 ctattaaatt ctctttagcg aggatttcaa atccgccacg tgtacaaaag gccatccctt 2760 ataatatt 2768 //