ID   FR878079; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
XX
AC   FR878079;
XX
DT   06-JUL-2011 (Rel. 109, Created)
DT   06-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Apple mosaic virus partial pol gene for polymerase, segment RNA 2, genomic
DE   RNA, isolate Apple Shimla 4
XX
KW   .
XX
OS   Apple mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-882
RA   Lakshmi V.;
RT   ;
RL   Submitted (24-JUN-2011) to the INSDC.
RL   Technology (CSIR), Plant Virology, Institute of Himalayan Bioresource, PO
RL   Box no-6, Himachal Pradesh-176061, INDIA.
XX
RN   [2]
RA   Lakshmi V., Hallan V., Verma R.R., Zaidi A.A.;
RT   "RNA 2 partial putative polymerase (1824-2705)";
RL   Unpublished.
XX
DR   MD5; e9dc21f91b4726c3ee0be86a9d1205f6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..882
FT                   /organism="Apple mosaic virus"
FT                   /segment="RNA 2"
FT                   /host="Malus x domestica"
FT                   /isolate="Apple Shimla 4"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Himachal Pradesh, Shimla"
FT                   /isolation_source="host leaves"
FT                   /collection_date="15-Sep-2010"
FT                   /db_xref="taxon:12319"
FT   CDS             <1..>882
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="pol"
FT                   /product="polymerase"
FT                   /function="replication"
FT                   /db_xref="GOA:F8MAG6"
FT                   /db_xref="InterPro:IPR001788"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F8MAG6"
FT                   /protein_id="CCC33054.1"
FT                   /translation="QQRLHHLTHYHTPTALGAPADFIDMWFGSHEISHIRDGPCGVGFS
FT                   VNYQPRTGDACTYLANTIITLSALAYMYDLLDPNITFVIASGDDSLIGSRVPLDRDDEF
FT                   KFTTLFNFEAKFPHNQPFVCSKFLCLVPTTDGGKKVVAVPNALKLNIKLGVKDLSPLTF
FT                   DSWYESWLDLIWYFDNYLIVSTMKDYLSHRYLRKPTMFQEGAMLAYGSIFANKEKCLRS
FT                   VFGISSEELKRMVRKLQPEKKRAPINQITMEKPIGDNLIVRKGFVEKELVDRKPRLGKK
FT                   ERKELEKRRLKT"
XX
SQ   Sequence 882 BP; 259 A; 158 C; 213 G; 252 T; 0 other;
     acagcagagg ttgcatcact tgactcacta tcacaccccc acagctcttg gcgcgcctgc        60
     cgacttcatt gacatgtggt ttggctcaca cgagatatcg catatcaggg acggaccctg       120
     cggtgtcggg tttagtgtga attatcagcc tcgaactgga gacgcttgta catacctggc       180
     aaatacgatc attacattat ccgctttggc atatatgtat gatcttttag atccgaatat       240
     tactttcgtc atcgcttcag gagacgatag tttaatagga tcgagagtac cattggatag       300
     ggacgacgag tttaaattca caactttgtt caactttgag gctaaatttc cacataatca       360
     gccctttgtt tgtagcaaat ttttgtgtct agtcccgacg actgatggtg gtaagaaagt       420
     ggtggctgtt ccgaatgcgt tgaagttgaa cataaaactt ggtgttaagg atttgagccc       480
     attaactttc gattcctggt atgaatcttg gttggatttg atttggtatt tcgataatta       540
     tctgattgtt tcgactatga aagactatct gagtcacaga tatttgagaa aaccaacaat       600
     gtttcaagaa ggagcgatgt tagcttacgg ttcgattttt gccaataaag agaagtgtct       660
     tagatctgta tttggcatta gttcggagga actcaagcga atggtgagga aattgcaacc       720
     agagaaaaag agagctccga taaatcaaat caccatggag aaaccaattg gagacaacct       780
     tatcgtgagg aaaggatttg tcgagaagga attggtggat agaaaaccca gattgggtaa       840
     gaaagagcgg aaagagctcg agaaacgtcg tttgaagacg ta                          882
//