ID FR715681; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC FR715681; XX DT 31-OCT-2010 (Rel. 106, Created) DT 31-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Malvastrum yellow vein Changa Manga virus complete sequence, clone MV10 XX KW complete genome. XX OS Malvastrum yellow vein Changa Manga virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Ilyas M.; RT ; RL Submitted (19-OCT-2010) to the INSDC. RL Ilyas M., School of Biological Sciences, University of the Punjab, RL University of the Punjab (New Campus), Lahore, 54590, PAKISTAN. XX RN [2] RA Muhammad I., Muhammad S.H., Briddon R.W.; RT "Characterization of a new begomovirus from Malvastrum in Pakistan"; RL Unpublished. XX DR MD5; 90b92408ad5d442949d79dcb3f0b3674. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Malvastrum yellow vein Changa Manga virus" FT /host="Malvastrum coromandelianum" FT /mol_type="genomic DNA" FT /country="Pakistan:Changa Manga" FT /isolation_source="host leaf" FT /collected_by="Muhammad Ilyas" FT /clone="MV10" FT /db_xref="taxon:911574" FT CDS 131..478 FT /gene="av2" FT /product="pre-coat protein" FT /db_xref="GOA:E3W7C9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E3W7C9" FT /protein_id="CBX43976.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISILRSRNYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKITNMGEQAHVQ FT EAQTVQDVQKP" FT CDS 291..1061 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:E3W7D0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E3W7D0" FT /protein_id="CBX43977.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVAPTVRVTKSRIWA FT NRPMYRKPRLYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1064..1468) FT /gene="ren" FT /product="replication enhancer protein" FT /db_xref="GOA:E3W7D1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E3W7D1" FT /protein_id="CBX43978.1" FT /translation="MDSRTGEPITAAQAWNGAYIWDVPNPLYFKILNHDNRPFTSNMDI FT IKIRIQFNYNLRRALGVHKCFLTFQIWTTLHPPTGLFLRVFKTQVLKYINNLGVISLNS FT IIRAVEHVFYNKLEQTMYVKQTSEIKFDIY" FT CDS complement(1161..1613) FT /gene="trAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:E3W7D2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E3W7D2" FT /protein_id="CBX43979.1" FT /translation="MRSSSPSKDHCTQIPIKVQHREAKRVHRRRRVDLNCGCSYYLSIN FT CHNHGFTHRGTHHCSSSMEWRLYLGRSKSPLFQDPQPRQPSIHEQHGHNKDQDPIQLQP FT TESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQVYQQSRSNLT" FT CDS complement(1510..2601) FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:E3W7D3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E3W7D3" FT /protein_id="CBX43980.1" FT /translation="MAPPKPFKINAKNYFITYPTCSLTKEEALSQLQNLQTPVNKKYIR FT ICRELHENGEPHLHVLLQFEGKYQCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT AKDGDILEWGEFQIDGRSARGGQQTANDAYAAALNSGSKSEALSVIKELAPKDYVLQFH FT NLNANLDRIFTPPLEVYVSPFSSSSFDQVPEELEEWVSENVVDAAARPHRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGTQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNTSLKNWALKNAIFVTLEGPL FT YSDSNQSTAQGSEEGTQEEESRS" FT CDS complement(2142..2444) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E3W7D4" FT /protein_id="CBX43981.1" FT /translation="MGNLIFTCSSSSKANTSARIRDSSTSYPQLGQHISIRTYRELNPA FT PTSSPISPRTGTFSSGGNFRSMEDLQEGDNRQQTTLTPQHLTQAVNQRLLASLRN" XX SQ Sequence 2754 BP; 719 A; 566 C; 633 G; 836 T; 0 other; accggatggc cgcgcgattt tttttgtggg cccctccact aactcctgtc tgccaataaa 60 atgacgcgct caaagcttaa ataatttccc gcctattata agtacttctt cgacaagttt 120 cattttgaaa atgtgggatc cactgttaaa cgagttccct gagaccgttc acgggtttcg 180 ttgcatgctt gcgattaaat accttcaaca actgtctgaa gaatactctc ctgatacggt 240 aggttacgat ctaattcgcg atttaatttc tattttacgt tccaggaatt atgtcgaagc 300 gtcctgccga tatcgtcatt tctacccccg cgtcgaaggt gcgtcgtcga ctgaacttcg 360 acagccccta tgcaacccgt gcagttgccc ccactgtccg cgtcacaaaa tcacgaatat 420 gggcgaacag gcccatgtac aggaagccca gactgtacag gatgtacaga agccctgatg 480 ttcccaaagg atgtgaaggc ccatgtaagg tgcagtcttt tgatgcgaag aatgatattg 540 gtcatatggg taaggtaatt tgtctttctg atgttactag gggtattggg ctgacccatc 600 gagtaggcaa acgtttctgc gtgaagtcat tgtattttgt tggcaaaata tggatggacg 660 agaacatcaa gaccaagaat catactaaca cagttatgtt ctggatcgta agagataggc 720 gcccatcagg aactcctaac gatttccagc aagtgttcaa tgtttatgac aacgagcctt 780 ctacggctac tgtgaagaac gatcaacgtg atcggtttca ggtgttgagg aggttccagg 840 caacagtcac aggtggtcaa tatgctgcta aggaacaagc tataattagg aaattctatc 900 gtgttaacaa ttatgtggtt tataatcacc aggaagctgg gaaatatgag aatcatactg 960 agaatgcgtt attgttgtac atggcatgta ctcatgcctc taatcctgtg tatgctactt 1020 tgaaagttag aagctacttc tacgattctg taacaaattg atattaataa atatcgaatt 1080 ttatttctga agtttgcttt acatacatag tttgttctaa tttattgtaa aatacatgtt 1140 ctacagccct aataatggaa ttaagtgaga ttactcctag attgttgata tacttgagga 1200 cttgggtttt gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattt 1260 ggaaggtcag aaaacacttg tgcactccca gagctctccg taggttgtag ttgaattgga 1320 tcctgatctt tattatgtcc atgttgctcg tgaatggacg gttgtcgtgg ttgaggatct 1380 tgaaatagag gggatttgga acgtcccaga tataggcgcc attccatgct tgagctgcag 1440 tgatgggttc ccctgtgcgt gaatccatgg ttgtggcagt tgattgaaag ataataagaa 1500 cacccgcaat taagatctac tctcctcctc ctgtgtaccc tcttcgcttc cctgtgctgt 1560 actttgattg gaatctgagt acagtggtcc ttcgagggtg acgaagatcg catttttgag 1620 agcccaattc tttaatgagg tgttcttgtc ctcgtcgagg aattctttat aactgctgtt 1680 tggcccagga ttgcatagga agattgtcgg tatgccgcct ttaatttgaa ctggcttccc 1740 gtacttggta ttggattgcc agtccctttg ggtccccata aactctttaa agtgcttgag 1800 gaagtgcgga tctacgtcat caatgacgtt ataccacgcg tcgttactat agacttttgg 1860 gcttagatcc aaatgcccac ataggtaatt atgtgggcct aaagacctag cccacattgt 1920 cttcccagta cgactatcac cctcaattac tatactttga ggtctatgag gccgcgcagc 1980 ggcgtcgaca acgttctcgg acacccactc ttcaagttcc tccgggactt ggtcgaaaga 2040 agaagatgaa aaaggagaaa cataaacctc caatggaggt gtaaaaatcc tatctagatt 2100 agcatttaaa ttatgaaatt gtaatacata atccttgggt gctaattcct taatgacgct 2160 aagagcctct gatttactgc ctgagttaag tgctgcggcg taagcgtcgt ttgctgtctg 2220 ttgtccccct cttgcagatc ttccatcgat ctgaaattcc ccccactcga gaatgtcccc 2280 gtccttggcg atataggact tgacgtcgga gctggattta gctccctgta tgttcggatg 2340 gaaatgtgct gacctagttg gggatacgag gtcgaagaat ctctgattct tgcactggta 2400 tttgccttcg aactggagga gcacgtgaag atgaggttcc ccattctcgt gaagctctct 2460 gcagattcta atgtattttt tgtttactgg ggtttgtaga ttttgtaatt gggaaagtgc 2520 ttcctcttta gtaagagagc atgtgggata agtgatgaaa taatttttgg catttatttt 2580 aaatggtttt ggaggagcca tggtcaatgg acaccgattg actcttcaga acaacttact 2640 ctatgaatcg gtgtctgggg tcttatttat acttggacac caaatggcat tttggtaaaa 2700 atagaaagaa attcaaattc cacaggctcc aaaagcggcc atccgtataa tatt 2754 //