ID FJ969830; SV 1; circular; genomic DNA; STD; VRL; 2834 BP. XX AC FJ969830; XX DT 19-MAR-2010 (Rel. 104, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE Sweet potato leaf curl virus isolate PB1-[BR:Sou1], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2834 RX DOI; 10.1016/j.virusres.2010.02.003. RX PUBMED; 20152869. RA Paprotka T., Boiteux L.S., Fonseca M.E., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT "Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm RT bank"; RL Virus Res. 149(2):224-233(2010). XX RN [2] RP 1-2834 RA Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT ; RL Submitted (22-APR-2009) to the INSDC. RL LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao RL Biologica, Brasilia, DF 70770-900, Brazil XX DR MD5; 4ad2facec18d0692e901400915fd24f9. XX FH Key Location/Qualifiers FH FT source 1..2834 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="PB1-[BR:Sou1]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:100755" FT gene 188..469 FT /gene="V2" FT CDS 188..469 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:D4HS95" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:D4HS95" FT /protein_id="ACY79440.1" FT /translation="MLSVKYLQSILKKYEPGTLGFELCSELIRIFRVRQYDRANARYAE FT ISSVWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 294..1058 FT /gene="V1" FT CDS 294..1058 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:D4HS96" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D4HS96" FT /protein_id="ACY79441.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNKDPLTFVQAFAMCDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1074..1508) FT /gene="Ren" FT CDS complement(1074..1508) FT /codon_start=1 FT /gene="Ren" FT /product="REn" FT /note="replication enhancer protein; C3" FT /db_xref="GOA:D4HS97" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D4HS97" FT /protein_id="ACY79442.1" FT /translation="MDSRTGESLNHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQLRVNYRERRQLGYHKIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN FT IGFLSLVNLVFVIRYLPRVCSWIDEVDTVDCIDDVKVLLY" FT gene complement(1225..1671) FT /gene="Trap" FT CDS complement(1225..1671) FT /codon_start=1 FT /gene="Trap" FT /product="TrAP" FT /note="trans-activating protein; C2" FT /db_xref="GOA:D4HS98" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4HS98" FT /protein_id="ACY79443.1" FT /translation="MSNPLSGYKRKCPEQEPLHAAAKKAKRKAPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTVPSQNNVCPREHTGENHP FT QIPAEGQLQGKEATGIPQDLPPIPDLDDPSNWCYSQLDWYFGTP" FT gene complement(1580..2674) FT /gene="Rep" FT CDS complement(1580..2674) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /note="replication-associated protein; C1" FT /db_xref="GOA:D4HS99" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4HS99" FT /protein_id="ACY79444.1" FT /translation="MPRAGRFNINAKNYFLTYPQCSISKEEALAQIQNIPTAVNKKFIK FT ICRELHEDGQPHLHVLLQFEGKFQCTNQRLFDLVSQTRSAHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQFH FT NLRSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WVQEEVSGAGAITRSSEEGQEESS" FT gene complement(2260..2517) FT /gene="C4" FT CDS complement(2260..2517) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D4HSA0" FT /protein_id="ACY79445.1" FT /translation="MGNLISMCFCNSKANSSARTNAYSTWSLKPGQHISILTFKELNPA FT PTSSPTSIRMETHWNGANSRSTADLLEEASRLLTMQQQKH" XX SQ Sequence 2834 BP; 730 A; 596 C; 674 G; 834 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccaccta gacacaacgc gtcttttccg 60 tactctcttt aatgatgaca ttgctttata aggaccaatc ctgttccagt cttggtcgcc 120 aagtatggct gatttgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacttgca aagtattttg aaaaaatacg agccaggaac 240 cctagggttc gaactctgtt cggagttaat ccgtatcttc agggtcaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttccccaca 540 cgggaacgtt tgtctgtgtc tcggatttta caagggggac tgggcttacc catcgtttgg 600 gtaagagggt gtgtattaag tccatgggta ttgatggtaa ggtttggatg gatgacaacg 660 tcgccaagag ggaccacacg aacatcatta cttactggtt ggtccgagat aggaggccca 720 ataaggatcc attgacgttt gtccaggcgt ttgcaatgtg tgataacgag ccaactactg 780 ctaagatccg aatggatctg agagatagaa tgcaggttct gaagaagttt tctgttactg 840 tatctggtgg cccttataac cacaaggagc aggctttagt taggaagttt tttaagggat 900 tgtataatca tgttacttat aatcataagg aggaggccaa gtatgagaat catttagaga 960 atgcgttaat gttgtattct gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcagggc ttatttctat gattcacaca acaattaata aaagtttatt ttattaatac 1080 agtaagacct ttacatcatc aatacaatct accgtatcta cttcatctat ccaagagcat 1140 actcttggaa gatatctaat aacaaaaact aaattaacta gactaagaaa tcctatattt 1200 gctaattcat tacatatgcg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gacgggtcgt caagatccgg aattggagga agatcttgtg gtatcccagt 1320 tgcctccttt ccctgtagtt gaccctcagc tggaatttga ggatggttct cccctgtgtg 1380 ctctcgtgga catacattat tctgagatgg aacggtgcag tccgacccac agacatgggg 1440 ttggtgtcga attcgagtgc tctcgtagtc tgagcatgat ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttgtggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtcctctgtt caggagcttt cctcttggcc ttcttcgctg ctgcgtgtaa 1620 tggctcctgc tccggacact tcctcttgta cccagaaagg ggattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggcttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagttggatt gccagtcctt ctgggccccc atgaactctt 1860 taaagtgctt taggtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tgtacacctt tggactcagg tccaaatgcc cacacagata attatgtggg cctaatgatc 1980 tagcccaaac tgttttacct attctacttg ggccttctat aacaatactt atgggcctat 2040 ctggccgcgc agcggcatcc atgacattct cagcagccca atcgctgata atgtcaggaa 2100 cattattgaa agaagaaatg gaaaaaggtg aagaatatac agatggtgga ggagaaaaaa 2160 tcctatctaa attactacgt aaattatgaa attgaaaaat aaaatctcta gggagtttct 2220 ccctaattat ttgtaatgct gcttcagcag agcctgcatt taatgcttct gctgctgcat 2280 cgttagcagt ctgctggcct cctctagcag atctgccgtc gacctggaat tcgccccatt 2340 ccaatgtgtc tccatcctta tcgacgtagg acttgacgtc ggagctggat ttagctcttt 2400 gaatgttagg atggaaatgt gctgacctgg tttgagagac caggtcgaat aggcgttggt 2460 tcgtgcactg gaatttgcct tcgaattgca gaagcacatg gagatgaggt tgcccatctt 2520 cgtgtagttc cctgcagatt ttaatgaatt ttttatttac tgcagttggg atattttgga 2580 tttgggctaa tgcttcttct ttggagatag agcattgggg atatgtaaga aaataatttt 2640 tggcatttat attgaacctc ccggctctcg gcattttaaa aagcaatggg tggacacaca 2700 aactctatat gaattggtgg aagggtggac aatttatatg tgtccaccta atggcatttt 2760 ggtaattaga acaactttaa tttgaattct gaaatcctat tggtccgcca taaagcgggc 2820 accgtattaa tatt 2834 //