ID FJ218485; SV 1; circular; genomic DNA; STD; VRL; 2728 BP. XX AC FJ218485; XX DT 02-OCT-2009 (Rel. 102, Created) DT 29-AUG-2012 (Rel. 113, Last updated, Version 2) XX DE Gossypium punctatum mild leaf curl virus [Gossypium gossypioides] isolate DE Gossyp-1 segment DNA-A, complete sequence. XX KW . XX OS Gossypium punctatum mild leaf curl virus [Gossypium gossypioides] OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2728 RX PUBMED; 22899988. RA Nawaz-Ul-Rehman M.S., Briddon R.W., Fauquet C.M.; RT "A melting pot of old world begomoviruses and their satellites infecting a RT collection of gossypium species in pakistan"; RL PLoS One 7(8):E40050-E40050(2012). XX RN [2] RP 1-2728 RA Nawaz-ul-Rehman M.S., Fauquet C.M.; RT ; RL Submitted (17-SEP-2008) to the INSDC. RL ILTAB, Donald Danforth Plant Science Center, 975 North Warson Road, Saint RL Louis, MO 63132, USA XX DR MD5; 75d435e622599b0941c8cc1d6a0c5d20. DR EuropePMC; PMC6571856; 31091727. XX FH Key Location/Qualifiers FH FT source 1..2728 FT /organism="Gossypium punctatum mild leaf curl virus FT [Gossypium gossypioides]" FT /segment="DNA-A" FT /host="Gossypium gossypioides" FT /isolate="Gossyp-1" FT /mol_type="genomic DNA" FT /country="Pakistan" FT /collection_date="Nov-2006" FT /db_xref="taxon:632113" FT gene 117..482 FT /gene="AV2" FT CDS 117..482 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:C9W948" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C9W948" FT /protein_id="ACQ65847.1" FT /translation="MWDPLVNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVSDVQKSGCSKGL" FT gene 277..1047 FT /gene="AV1" FT CDS 277..1047 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:C9W949" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C9W949" FT /protein_id="ACQ65846.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTH" FT gene complement(1050..1454) FT /gene="AC3" FT CDS complement(1050..1454) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /note="replication enhancer protein; REn" FT /db_xref="GOA:C9W950" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C9W950" FT /protein_id="ACQ65848.1" FT /translation="MDSRTGEPITAAQAGNGAYIWDVPNPSYFKIISHVNRPFTTNMDI FT LTIRIQFNYNTRKALGLHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY" FT gene complement(1147..1599) FT /gene="AC2" FT CDS complement(1147..1599) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /note="trascription activating protein; TrAP" FT /db_xref="GOA:C9W951" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C9W951" FT /protein_id="ACQ65849.1" FT /translation="MRSSSHLKDPCTQVPIKVQHREAKRRIRRRRVDLDAGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGRSKSLLFQDHQPRQPSIHDEYGYTHDQDPVQLQH FT SESSGTAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQIFEQSRCNFN" FT gene complement(1496..2587) FT /gene="AC1" FT CDS complement(1496..2587) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /note="replication associated protein" FT /db_xref="GOA:C9W952" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C9W952" FT /protein_id="ACQ65850.1" FT /translation="MPRNSSFCVNAKNIFLTYPKCPIPKEQMLDNLRSINCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPNNSTQFHPNFQGAKSSSDVKSYI FT EKDDDYMPGVSFRSTEDLLEEVNRQLMLQQQRPCMQVQLKQLYAIIREKLPKDYIFQYH FT NLKCNLDRIFTPPVEVYVSPFSPSSFDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTGSYKEFLDEEKNTALKNWAVKNAIFITLEGPL FT YSGTNQSTAQGSEETHQEEESRS" FT gene complement(2158..2430) FT /gene="AC4" FT misc_feature complement(2158..2430) FT /gene="AC4" FT /note="nonfunctional AC4 due to mutation" XX SQ Sequence 2728 BP; 721 A; 551 C; 648 G; 808 T; 0 other; accggatggc cgcgcgattt ttttgtgggc ccccgattta tgagattgct ccctcaaagc 60 taaataacgc tcccgcacac tataagtact ttgcgcacta agtttcaaat tgaaacatgt 120 gggatccact agtaaacgaa ttcccggata cggtgcacgg gtttcggtgt atgctttctg 180 tgaaatattt gcaacttttg tcgcaggatt attctccaga tacgcttggg tacgagttaa 240 taagggattt aatttgtatt ttacgctccc gtaattatgt cgaagcgagc tgccgatatc 300 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag cccatacacc 360 agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac aggcatggac aaacaggcct 420 atgaacagga aacccagaat gtatcggatg tacagaagtc cggatgttcc aaagggttgt 480 gaaggcccat gtaaggtaca atcttttgaa tctcgacacg atgtcgttca tattggtaag 540 gtaatgtgta tttctgatgt tacgcgtgga gtcggtttga cccatcgtat aggtaagcgt 600 ttttgtgtca agtcagttta tgttttaggt aagatatgga tggacgagaa cattaagacc 660 aagaaccata cgaattcggt gatgtttttc cttgttcgcg atcgacgacc ggtagataaa 720 cctcaggatt ttggtgaggt atttaacatg tttgacaacg aacccagtac agcaactgtg 780 aagaatagtc atagggaccg ttaccaggtg ttgaggaaat ggcatgcaac cgttacgggt 840 ggtcaatatg ctagtaagga acaggctttg gtcaagaagt ttgtcagagt taacaattat 900 gttgtttaca atcaacagga agcagggaaa tacgagaatc ataccgaaaa tgcgttaatg 960 ctttatatgg cttgtactca cgctagcaac cctgtttatg ctacgttgaa gatcaggata 1020 tatttctatg actctgtaac gcactgatat taataaagtt tgaattttat ttctgaatat 1080 tgatctacat acatcgtttg ttggattaca ttgtacaata catgttctac agctttaata 1140 actaaattaa ttgaaattac accgagattg ttcaaatatt tgaggacttg ggttttgaat 1200 acccttaaga aaagaccagt ctgagggtgt aaggtcgtcc agattcggaa ggttagaaaa 1260 cacttgtgca gtcccagagc tttccgagtg ttgtagttga actggatcct gatcgtgagt 1320 atatccatat tcgtcgtgaa tggacggttg acgtggctga tgatcttgaa ataagaggga 1380 tttggaacgt cccagatata tgcgccattc cctgcttgag ctgcagtgat gggttcccct 1440 gtgcgtgaat ccatggttgt ggcagttgat tgacagataa tagctacacc ccgcatcaag 1500 atctactctc ctcctcctga tgcgtctctt cgcttccctg tgctgtactt tgattggtac 1560 ctgagtacag gggtccttca agtgtgatga agatcgcatt ttttaccgcc cagtttttta 1620 gtgcggtgtt cttttcctcg tctaggaatt ctttataact gccagtggga ccaggattgc 1680 ataggaagat tgttggtatg ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg 1740 attgccagtc cctttgggcc cccatgaact ctttaaagtg tttgaggaaa tgcgggtcga 1800 cgtcatcaat gacgttatac caggcgtcgt tactgtagac cttgggactc aggtccagat 1860 gtccacacaa atagttatgt ggtcccaatg acctagccca catcgtcttc cccgtacgac 1920 tatctccctc aattactata cttcgaggtc taaggggccg cgcagcggga tcgacaacgt 1980 tatcgatggc ccaaacttca agttcttctg gaacttgatc aaaagaagaa ggagaaaaag 2040 gagaaacata aacctccaca ggaggtgtaa aaatcctatc taaattacac tttaaattgt 2100 ggtattgaaa aatatagtct ttcgggagtt tttcccttat aattgcgtaa agctgcttca 2160 gctgaacctg catgcagggc ctctgctgct gcagcatgag ctgtctgttg acctcctcga 2220 gcagatcttc cgtcgacctg aaactgaccc caggcatgta atcatcgtcc ttctcgatgt 2280 aggatttgac atcggaactg gacttagctc cctggaagtt tggatggaat tgggtggagt 2340 tattagggtg agtgacatcg aaatgtctgg ggtttctgaa cttggcttta cctttgaact 2400 ggatgagggc gtggatatgc agagacccat cttggtgttt ctcttgtgct actctgataa 2460 ataatttatc agatgggcaa tttattgaac gaagattgtc gagcatttgc tctttgggta 2520 ttgggcattt tggataagta aggaagatat ttttggcatt tacacagaaa gagctattac 2580 gaggcatatt gaattgggga cactcaaaac tctgaggaat ggggaactcg ggggacgcat 2640 ttataatggt gtccccaaat gcatttggta attcagaaag aaatttcaaa atctccacgc 2700 tccaaaaagc ggccatccgt ataatatt 2728 //