ID EU939533; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC EU939533; XX DT 17-SEP-2008 (Rel. 97, Created) DT 17-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Chilli leaf curl virus isolate Narwan segment DNA A, complete sequence. XX KW . XX OS Chilli leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2756 RX DOI; 10.1111/j.1365-3059.2007.01513.x. RX AGRICOLA; IND43887815. RA Senanayake D., Mandal B., Lodha S., Varma A.; RT "First report of Chilli leaf curl virus affecting chilli in India"; RL Plant Pathol. 56(2):343-343(2007). XX RN [2] RP 1-2756 RA Senanayake D., Mandal B., Varma A.; RT ; RL Submitted (02-AUG-2008) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, New Delhi, Delhi RL 110012, India XX DR MD5; 9dda21c8a15fe1877ab32da7a3281efa. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Chilli leaf curl virus" FT /segment="DNA A" FT /host="Capsicum annuum" FT /isolate="Narwan" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="05-Dec-2004" FT /db_xref="taxon:172278" FT gene 148..504 FT /gene="AV2" FT CDS 148..504 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /note="AV2 protein" FT /db_xref="GOA:B5THK1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B5THK1" FT /protein_id="ACH86017.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLLENTYSPDTLGYDLIRDL FT ISVIRAKNYVQATSRYNHFHARLEGTPPSQLRQPLCQPCCCPHCPRHKGQSMGEQAHVQ FT KAQDVQDVQKPRCS" FT gene 308..1078 FT /gene="AV1" FT CDS 308..1078 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="AV1 protein" FT /db_xref="GOA:B5THK2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B5THK2" FT /protein_id="ACH86018.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPTVRVTKARAWV FT NRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVARGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1072..1479) FT /gene="AC3" FT CDS complement(1075..1479) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="AC3 protein" FT /db_xref="GOA:B5THK3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5THK3" FT /protein_id="ACH86021.1" FT /translation="MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFLRNHDI FT ITVQIRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVYKYLNNFAVISINN FT VLRAVNHVLWNVLAQTIHVQSSNIIKFNLY" FT gene complement(1220..1624) FT /gene="AC2" FT CDS complement(1220..1624) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /note="AC2 protein" FT /db_xref="GOA:B5THK4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5THK4" FT /protein_id="ACH86020.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKRGTRRRRADLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREFRVYLGDNKSPVFQDNRAPQPAIPEEPRHHHRADTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT gene complement(1527..2612) FT /gene="AC1" FT CDS complement(1527..2612) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /note="AC1 protein" FT /db_xref="GOA:B5THK5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5THK5" FT /protein_id="ACH86019.1" FT /translation="MPRVGRFNINAKNYFLTYPNCSLTKEEALSQLQNLETPVNKLFIR FT VSRELHENGEPHLHVLVQFEGKYQCTNNRFFDLISPTRSAHFHPNIQRAKSSSDVKAYV FT EKDGDSIDFWSFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNANLDRIFTPPLEVYVSPFCSSSFDQVPEELEEWAAENVLGAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGHNSSYKEFLDEEKNSALKYWALKNATFITLEGPL FT YSGSNQSAAQAGQEGDQASSG" FT gene complement(2162..2455) FT /gene="AC4" FT CDS complement(2162..2455) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5THK6" FT /protein_id="ACH86022.1" FT /translation="MGNLIYTCSSNSRENTNAQTTDSSTLFPQPGQHISIRTFRELKAL FT QTSKPMWRKTETPLTFGVSKSMADQLEEVANLPTTHMPRQSIQGPKLRPSIF" XX SQ Sequence 2756 BP; 744 A; 567 C; 636 G; 809 T; 0 other; accggatggc cgcgattttt tttacccgtg ggccccacca cgcacgtgct gacaaggaca 60 tgtgcaccaa ttaaaaccgt tcctcatagc ttaattattt catggtcccc cctataaact 120 tgggctccaa gtagtgcact cttaccaatg tgggatccat tagtaaacga gtttcctgaa 180 accgttcacg gttttaggtg tatgttagca gttaaatatc tgcagctact agaaaataca 240 tattctccag acactctggg gtacgattta atcagggatt tgatctccgt tattagggct 300 aagaattatg tccaagcgac cagcagatat aatcatttcc acgcccgcct cgaaggtacg 360 ccgccgtctc aacttcgaca gcccttatgc cagccgtgct gctgccccca ctgtccgcgt 420 cacaaaggcc agagcatggg tgaacaggcc catgtacaga aagcccagga tgtacaggat 480 gtacagaagc ccagatgttc ctaggggttg tgaaggccca tgtaaggtcc agtcttttga 540 gtctagacac gatgtagttc atatagggaa ggttatgtgt attagtgatg ttgcccgtgg 600 tactgggtta acccatagag taggtaagcg tttctgtgtt aagtctgtgt atgtattagg 660 gaagatatgg atggatgaga atatcaagac taagaatcac acgaatagtg tgatgttttt 720 ccttgtccgt gatcgtcgtc ctgttgataa accacaagat tttggagagg tgttcaacat 780 gtttgacaac gagcctagca ctgccactgt gaagaatatg catagagatc gttatcaggt 840 tttgaggaaa tggcacgcaa cggttactgg tggacagtac gcgtcgaagg aacaggcatt 900 agttaagaag ttcgttaggg ttaataatta tgttgtgtat aaccagcagg aagctggtaa 960 atatgagaat catactgaga atgcattgat gttgtacatg gcgtgtactc acgcctctaa 1020 tcctgtgtat gctaccttaa agatacggat ctatttctat gattcagtat caaattaata 1080 aagattgaat tttattatat ttgaactttg tacatgaatt gtttgtgcta atacattcca 1140 taatacatgg ttgacagctc taagtacatt gtttatacta attacagcaa aattatttaa 1200 atacttatac acttgggtcc taaataccct taagaaatga ccagtctgag gctgtaaggt 1260 cgtccagatt cggaaggtta gaaaacattt gtgtatcccc aacgctttcc tcaggttgtg 1320 attgaaccgt atctgcacgg tgatgatgtc gtggttcctc aggaatggcc ggttgtggtg 1380 ctctgttatc ttgaaataca ggggatttgt tatctcccag ataaacacgg aattctctgc 1440 ttgagctgca gtgatgggtt cccctgtgcg tgaatccata gccgtggcag cgtaatgcga 1500 tgaaatatga acaaccgcag tctaggtcag cccgacgacg cctggtcccc ctcttggcca 1560 gcctgtgctg cactttgatt ggaacctgag tagagtgggc cttcgagggt gatgaaggtc 1620 gcattcttta aagcccaata tttgagtgcg ctatttttct cttcatccaa gaactcttta 1680 tagctggaat tgtgtcctgg attgcagagg aagatagcgg gaattccacc tttaatttga 1740 actggttttc cgtatttagt gtttgattgc cagtcccttt gggcccccat gaattcttta 1800 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc gtcattactg 1860 tagacctttg ggctaaggtc gagatgtcca cacaaatagt tgtgtggacc taatgacctg 1920 gcccacatag tcttccccgt cctactatca ccctctatga caatactcat gggtcttaac 1980 ggccgcgcag cggcaccgag aacattctcg gcagcccatt cctcaagttc ctcgggaact 2040 tgatcaaaag aagaagaaca aaaaggagaa acataaacct ccaagggagg tgtaaaaatc 2100 ctatctaaat tagcatttaa attatgaaat tgtaaaacat aatctttggg agctttctcc 2160 cttaaaatat tgagggccga agctttggac cctgaattga ttgcctcggc atatgcgtcg 2220 ttggcagatt ggcaacctcc tctagctgat ctgccatcga tttggaaact ccaaaagtca 2280 atggagtctc cgtctttctc cacataggct ttgacgtctg aagagctttt agctctctga 2340 atgttcggat ggaaatgtgc tgaccgggtt ggggaaataa ggtcgaagaa tctgttgttt 2400 gtgcattggt attttccctc gaattggacg agcacgtgta gatgaggttc cccattctcg 2460 tgcaattctc gagaaaccct aataaataat ttattaactg gggtttccaa gttctgtagt 2520 tgggaaagtg cctcttcttt agtaagagag cagttgggat atgttaggaa ataattttta 2580 gcatttatat tgaatctccc aaccctaggc atattggtgg acactcaaac ttactatgta 2640 atcggtggaa tggtggacaa tatatatgtg tccaccaatg gcactttggt aattattgtc 2700 agctaaaaaa attcaaaatt caaatttcga caaaagcggc catccgcatt aatatt 2756 //