ID EU419570; SV 1; linear; genomic RNA; STD; VRL; 2073 BP. XX AC EU419570; XX DT 13-FEB-2008 (Rel. 94, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 2) XX DE Soybean dwarf virus isolate ClIL1 minor coat protein, major capsid protein, DE and putative movement protein genes, complete cds. XX KW . XX OS Soybean dwarf virus OC Viruses; Riboviria; Luteoviridae; Luteovirus. XX RN [1] RP 1-2073 RX DOI; 10.1007/s00705-009-0370-4. RX PUBMED; 19360376. RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT "Sequence diversity of readthrough proteins of Soybean dwarf virus isolates RT from the Midwestern United States"; RL Arch. Virol. 154(5):861-866(2009). XX RN [2] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT ; RL Submitted (22-JAN-2008) to the INSDC. RL Dept. Crop Sci., University of Illinois, USDA-ARS, 1102 S. Goodwin Ave., RL Urbana, IL 61801, USA XX DR MD5; 4d22ce093f5af930f2c2fbed9e20d417. XX FH Key Location/Qualifiers FH FT source 1..2073 FT /organism="Soybean dwarf virus" FT /isolate="ClIL1" FT /mol_type="genomic RNA" FT /country="USA" FT /isolation_source="virus-infected leaf tissue" FT /note="acronym: SbDV" FT /db_xref="taxon:12049" FT CDS 1..2073 FT /codon_start=1 FT /transl_except=(pos:601..603,aa:OTHER) FT /product="minor coat protein" FT /note="readthrough protein; translated by readthrough of FT in-frame termination codon" FT /db_xref="GOA:B1A410" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:B1A410" FT /protein_id="ABZ80568.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPKXVDGEPGPKPGPDPTPPPAPPP FT EPTPAKHERFIVYTGTLSTLISARQNSDSISLYSIRDQRVRYIEDENANWTYIKAQWYS FT QNSVEAVPMFIYPVPQGTWSVEISCEGYQATSSTTDPHRGKSDGMIAYDDDQTKVWNVG FT VQNNVTITNNKADADWKYGHPNLTINGERFDQQQVVEKDGTVSFHLVTTGPNASFFLAG FT PAVKKIAKYNFCISYGAWTDRDMEFGLVSVVLDEHLEGVRGSQYVRKTLRPGHISVNRT FT HRLQEMPPMREDFSEEDNSSSDSNTYKTDNSPLTVHLVKAGDEENYTTDRSDDVEPTLH FT DADVMKFSGFVGAKDRFTLQGADPIGPGDRSVRRFRPSATLKSAFHSGPTPDELYNAGA FT EQADHDFEHFVSRGKEKLQDEDPMAKLEREAEDLKPDSDNEDNDYDRTAPVFNPADGDP FT WSGIKIKPRLKDQDMRSTLSTGTLKGGSLKPKKEPTPRFEPAPKSVLDRIRRRQV" FT CDS 1..603 FT /codon_start=1 FT /product="major capsid protein" FT /note="coat protein" FT /db_xref="GOA:Q3YB88" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q3YB88" FT /protein_id="ABZ80566.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPK" FT CDS 17..586 FT /codon_start=1 FT /product="putative movement protein" FT /note="P4" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:B1A412" FT /protein_id="ABZ80567.1" FT /translation="MSQYNDDVIVEPHEALHEFSSWLFQRPPAQHSAEEDNDDEGEIIE FT EEAIFPEDQARLTHSSFRRTASMAVPRELSLSGRLYQSASHSLMEYSRPTMNIRSRVSY FT YSSSPRPLPPRQAPSLMSLTHTASTPKFNRYSINSQLQRAVRNDSPPRLSMASNGMIPV FT KTSSRSTTRGMETPRSQAPSRSRSLS" XX SQ Sequence 2073 BP; 627 A; 486 C; 487 G; 473 T; 0 other; atggtcgcgg ttagcaatgt cacaatacaa cgacgacgta atcgtagagc cgcacgaagc 60 gctccacgag ttcagctcat ggctattcca acgaccaccg gcgcaacaca gcgcagaaga 120 agacaacgac gacgaaggag aaataataga ggaggaggca atatttccgg aggatcaggc 180 aaggctcaca cattccagtt ttcgaaggac ggcatcaatg gcagttccaa gggaactatc 240 actttcgggc cgtctttatc agagtgcaag ccactctctg atggaatact caaggcctac 300 catgaatata agatcacgag tatcttatta cagttcatct ccgaggcctc ttccacctcg 360 tcaggctcca tcgcttatga gcttgaccca cactgcaagt actccgaaat tcaatcgcta 420 ctcaataaat tctcaattac aaagagcggt tcgaaacgat tccccaccaa ggttatcaat 480 ggcctcgaat ggcatgatac cagtgaagac cagttcaagg tccactacaa ggggaatgga 540 gacgccaaga tcgcaggctc cttcaagatc acgatcgttg tcttaactca gaatcccaaa 600 taggtagacg gagaaccggg gccgaagcca ggtccggacc ccacaccccc accagcacca 660 ccacctgaac cgacgccagc caaacatgaa agattcattg tttacaccgg tacactgtca 720 acactcatca gtgctcgaca gaactcagac agtatatcac tctactcaat tcgagaccag 780 agggtcagat atattgaaga tgagaatgca aactggacgt acatcaaagc gcaatggtat 840 tcacagaatt ctgtggaagc agtaccaatg tttatctacc cagttccgca aggtacttgg 900 tcagttgaaa tctcatgtga aggttaccag gcaacatcga gcaccacgga tccccaccgg 960 gggaagtccg atggaatgat tgcttatgac gatgatcaaa ccaaggtgtg gaatgttggt 1020 gtgcaaaata atgtaaccat aaccaataat aaagccgatg ctgattggaa atacggtcac 1080 cctaatttaa caattaatgg tgaacgtttt gaccagcagc aagtagtcga gaaagatgga 1140 acggtctcgt ttcatttagt aactactggg cccaatgcga gtttcttttt agccggccct 1200 gccgttaaga agattgccaa gtataatttc tgtatatcat atggagcttg gactgatcgc 1260 gatatggagt ttggtttggt atctgttgtt ctcgatgaac acttagaggg tgttagaggt 1320 tctcagtacg ttaggaaaac gctaagacca ggtcatatta gcgtcaatcg tacccaccga 1380 ttgcaagaaa tgcctcccat gcgagaggat ttcagtgagg aagataatag tagtagtgat 1440 agtaatacat acaaaacgga caactctccc ttgaccgttc accttgtaaa agcaggtgac 1500 gaggagaatt atacaacaga tcgatcggac gatgttgaac ccacacttca tgatgctgat 1560 gtcatgaagt tctccgggtt tgttggagcc aaagataggt ttacgttgca gggcgctgat 1620 ccaatcggcc ctggtgacag atctgtccgt cgcttcagac cgtctgccac attgaagtct 1680 gcgttccatt cgggaccgac tcctgatgag ttgtacaacg ctggtgctga acaagcggat 1740 cacgacttcg aacactttgt ctctcgaggc aaagagaaac tacaggatga agatccaatg 1800 gccaaactcg aaagagaggc tgaggattta aaacctgata gtgataacga agataacgat 1860 tatgatcgaa ccgctcctgt gttcaaccca gctgatggtg acccctggtc aggcattaaa 1920 ataaagccta gattaaaaga tcaggatatg aggtccacct tgagcactgg caccttgaaa 1980 ggtggttcac tgaaaccgaa gaaagaacca accccaaggt ttgaaccagc gccaaagtcc 2040 gttttagata ggattagacg taggcaagtt taa 2073 //