ID   DQ907127; SV 1; linear; genomic RNA; STD; VRL; 502 BP.
XX
AC   DQ907127;
XX
DT   10-JAN-2007 (Rel. 90, Created)
DT   15-JUN-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAS isolate PAS58P3b04 coat protein and
DE   movement protein genes, partial cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAS
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-502
RX   DOI; 10.1007/s00705-006-0913-x.
RX   PUBMED; 17216137.
RA   Robertson N.L., French R.;
RT   "Genetic structure in natural populations of barley/cereal yellow dwarf
RT   virus isolates from Alaska";
RL   Arch. Virol. 152(5):891-902(2007).
XX
RN   [2]
RP   1-502
RA   Robertson N.L., French R.;
RT   ;
RL   Submitted (17-AUG-2006) to the INSDC.
RL   Subarctic Agricultural Research Unit, Arctic Plant Germplasm, United States
RL   Department of Agriculture, Agricultural Research Service, 533 E. Fireweed
RL   Avenue, Palmer, AK 99645, USA
XX
DR   MD5; 2623a664610b8036d29b6174af23f51f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..502
FT                   /organism="Barley yellow dwarf virus PAS"
FT                   /isolate="PAS58P3b04"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:2169985"
FT   CDS             <1..>502
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:A1YCY5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:A1YCY5"
FT                   /protein_id="ABI95729.1"
FT                   /translation="QPNRAGPRRRNGRRTGRRGPNSIPGSTGRTEVFIFSVDNLKANSS
FT                   GTIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASATTSGAIFVELDTACKQSA
FT                   LGSYINSFTISKTASKSFRAEAINGKEFQESTIDQFWLLYKANGTTTDTAGQFIIKINV
FT                   SMLT"
FT   CDS             <1..412
FT                   /codon_start=2
FT                   /product="movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:A1YCY6"
FT                   /protein_id="ABI95730.1"
FT                   /translation="NPIEQDPDDEMVDAQEEEGQILYLDQQAGLRYSYSQSTTLKPTLP
FT                   GQSNSVPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPPLRRALSLLNSTPRASNQP
FT                   WVATLIPSPSAKLPPSPSEPRRLMGRNSKNQR"
XX
SQ   Sequence 502 BP; 150 A; 139 C; 107 G; 106 T; 0 other;
     caacccaatc gagcaggacc cagacgacga aatggtcgac gcacaggaag aagagggcca        60
     aattctatac ctggatcaac aggcaggact gaggtattca tattctcagt cgacaacctt       120
     aaagccaact cttccgggac aatcaaattc ggtcccagtc tatcgcaatg cccagcgctt       180
     tcagacggaa tacttaagtc ctaccaccgt tacaagatca caagtatccg tgttgagttt       240
     aagtcacacg cgtccgccac tacgtcgggc gctatctttg ttgaactcga caccgcgtgc       300
     aagcaatcag ccctgggtag ctacattaat tccttcacca tcagcaaaac tgcctccaag       360
     tccttcagag ccgaggcgat taatgggaag gaattccaag aatcaacgat agaccagttc       420
     tggctactct acaaggcaaa cgggaccact actgacaccg ctggacagtt catcataaag       480
     ataaacgtca gtatgttgac tc                                                502
//