ID   DQ792506; SV 1; linear; genomic RNA; STD; VRL; 757 BP.
XX
AC   DQ792506;
XX
DT   27-SEP-2006 (Rel. 89, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAS isolate PAS37P5o03_2 RNA-dependent RNA
DE   polymerase and coat protein genes, partial cds; and putative movement
DE   protein gene, complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAS
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-757
RX   DOI; 10.1007/s00705-006-0846-4.
RX   PUBMED; 17013543.
RA   Robertson N.L., French R.;
RT   "Genetic analysis of a novel Alaska barley yellow dwarf virus in the family
RT   Luteoviridae";
RL   Arch. Virol. 152(2):369-382(2007).
XX
RN   [2]
RP   1-757
RA   Robertson N.L., French R.;
RT   ;
RL   Submitted (21-JUN-2006) to the INSDC.
RL   Arctic Plant Germplasm, United States Department of Agriculture,
RL   Agricultural Research Service, 533 E. Fireweed Ave., Palmer, AK 99645, USA
XX
DR   MD5; b0f964df37ba88d1182c9d93ac404eab.
DR   GrainGenes; DQ792506; DQ792506.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..757
FT                   /organism="Barley yellow dwarf virus PAS"
FT                   /host="Avena sativa L."
FT                   /isolate="PAS37P5o03_2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="leaf tissue"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:2169985"
FT   CDS             <1..49
FT                   /codon_start=2
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="ORF2"
FT                   /db_xref="GOA:Q06KS1"
FT                   /db_xref="UniProtKB/TrEMBL:Q06KS1"
FT                   /protein_id="ABI34144.1"
FT                   /translation="SILLSIPENNSHNEY"
FT   CDS             163..>757
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q06KS0"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q06KS0"
FT                   /protein_id="ABI34145.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRSRRTIRPVVVVQPNRTGPRRRNGRR
FT                   SGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIIRKSVSMLT"
FT   CDS             206..667
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /note="17kDa; ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q06KR9"
FT                   /protein_id="ABI34146.1"
FT                   /translation="MAQGDGAVEQFGQWLWSNPIEQDPDDEMVDAQEEEGQILYLDQQA
FT                   GLRYSYSQSTTLKPTLPGQSNSVPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPPL
FT                   RRALSLLNSTPRASNQPWVATLIPSPSAKLPPSPSEPRRLMGRNSKNQR"
XX
SQ   Sequence 757 BP; 229 A; 188 C; 165 G; 175 T; 0 other;
     atcaatcctc ctctccattc cggagaacaa ctcgcacaac gaatattgat taccaaatct        60
     tggcagggtt tggaataggg tttatagtag gtattccctg tacattagct ctcacgtatt       120
     ttatttacaa taaagtttca gacactacta gagaggtagt gaatgaattc agtaggccgt       180
     agaggaccta gacgagcaaa tcaaaatggc ccaaggagac ggagccgtag aacaattcgg       240
     ccagtggttg tggtccaacc caatcgaaca ggacccagac gacgaaatgg tcgacgctca       300
     ggaagaagag ggccaaattc tatacctgga tcaacaggca ggactgaggt attcatattc       360
     tcagtcgaca accttaaagc caactcttcc gggacaatca aattcggtcc cagtttatcg       420
     caatgcccag cgctttcaga cggaatactt aagtcctacc accgttacaa gatcacaagt       480
     atccgtgttg agtttaagtc acacgcgtcc gccactacgt cgggcgctat ctttgttgaa       540
     ctcgacaccg cgtgcaagca atcagccctg ggtagctaca ttaattcctt caccatcagc       600
     aaaactgcct ccaagtcctt cagagccgag gcgattaatg ggaaggaatt ccaagaatca       660
     acgatagacc aattctggct actctacaag gcaaatggga ccactactga caccgctgga       720
     cagtttatca taaggaaaag cgtcagtatg ttaactc                                757
//