ID DQ395342; SV 2; linear; genomic DNA; STD; VRL; 2609 BP. XX AC DQ395342; XX DT 06-MAR-2006 (Rel. 87, Created) DT 09-JUN-2007 (Rel. 92, Last updated, Version 5) XX DE Euphorbia mosaic virus - [Jamaica:Wissadula], complete sequence. XX KW . XX OS Euphorbia mosaic virus - [Jamaica:Wissadula] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RX DOI; 10.1111/j.1365-3059.2007.01514.x. RX AGRICOLA; IND43887809. RA Collins A.M., Roye M.E.; RT "Two new bipartite begomoviruses infecting Wissadula amplissima in RT Jamaica"; RL Plant Pathol. 56(2):340-340(2007). XX RN [2] RP 1-2609 RA Collins A.M., Roye M.E.; RT ; RL Submitted (08-FEB-2006) to the INSDC. RL Biotechnology Centre, University of the West Indies, Mona, 2 St. John's RL Close, Kingston, Jamaica XX RN [3] RC Sequence update by submitter RP 1-2609 RA Collins A.M., Roye M.E.; RT ; RL Submitted (06-JUN-2007) to the INSDC. RL Biotechnology Centre, University of the West Indies, Mona, 2 St. John's RL Close, Kingston, Jamaica XX DR MD5; fd2427a28181c57eadc52fd963e0c050. DR EuropePMC; PMC2974675; 20958988. XX CC On Jun 6, 2007 this sequence version replaced gi:88953877. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Euphorbia mosaic virus - [Jamaica:Wissadula]" FT /segment="DNA-A" FT /host="Wissadula amplissima" FT /mol_type="genomic DNA" FT /country="Jamaica" FT /db_xref="taxon:447196" FT gene 198..953 FT /gene="CP" FT CDS 198..953 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A6M941" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A6M941" FT /protein_id="ABQ97010.1" FT /translation="MVKRDAPWRLSAGTFKVSRSSNYSPRGGMGPKLDKAAAWVNRPMY FT RKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT CDS complement(950..1348) FT /codon_start=1 FT /product="REn" FT /db_xref="GOA:A6M942" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6M942" FT /protein_id="ABQ97012.1" FT /translation="MDSRTGESITASQAENSVFIWEVPNPLYFKMCRVEDPPHTWVRIY FT HIQIRFNYNLRKELSLHQAFLNFQVWTTSIRASGTTYLSRFRHLVMLYLDRLGVIGINN FT VIRAVRFATDRSYVNYVLEDHQIKFNIY" FT CDS complement(1089..1484) FT /codon_start=1 FT /product="TrAP" FT /db_xref="GOA:A6M943" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6M943" FT /protein_id="ABQ97011.1" FT /translation="MLNSSSSTPPSIKPQHRIAKKRAIRRRRIDLNCGCSIYLHINCAD FT NGFTHRGEHHCVSGREFRFYLGGSKSPLFQDVPSRGSTSYMGQNIPHTNQVQLQPQEGA FT ESTPSLPELPSLDDINSSFWDDLFKSL" FT gene complement(1396..2475) FT /gene="Rep" FT CDS complement(1396..2475) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /db_xref="GOA:Q27J80" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q27J80" FT /protein_id="ABD58992.2" FT /translation="MPRNPNSFRLQARNIFLTYPQCDVPKDEVLQIIQHLPWSIVKPTY FT IRVAREEHRDGFPHLHCLIQLSGKSNIKDARFFDISHPRRSTCFHPNIQGAKDTNAVKN FT YITKDGDYCESGQYKVSGGTKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNL FT RANIERLFKKAADPWVPPFALSSFVNVPEEMQEWADDYFGRGAAARPERPISLIVEGDS FT RTGKTMWARALGPHNYLSGHLDFNSKVYSNQVEYNVIDDVNPQYLKLKHWKELIGAQRD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGGSYKYFLDKEENASLKAWTLKNAKFVFLNSP FT LYQATAQDCQEESHTSTTD" FT CDS complement(2031..2396) FT /codon_start=1 FT /gene="Rep" FT /product="AC4" FT /db_xref="UniProtKB/TrEMBL:A6M944" FT /protein_id="ABQ97013.1" FT /translation="MRFFRLFNICLGQSSNRRISESQERNIAMGSRTYTASYNYLASPT FT SRMLDFSTYLTPDGQPVFTRTFKEPKTPTPSRITSPRTAIIVNPGNIRCLGEQSRIKMT FT YTTTPSMQQVRERLSTL" XX SQ Sequence 2609 BP; 679 A; 584 C; 609 G; 737 T; 0 other; accggatggc cgcgattttt tcggagtccc tcggcccagg cccaaacgca aagctattct 60 cgtcctttta tgggaccacc acaagtaatt tatgtccaat catagtgcgt ctgacgagtc 120 tatataatta tgacttaccc accaagttgt ggtccctata aataaagatg attagtccca 180 tacctcttta attcaaaatg gttaagaggg atgccccatg gcgactatcg gcggggacct 240 tcaaggtttc ccgctcttct aactattcgc ctcgtggagg tatgggccct aaattggata 300 aggccgctgc gtgggttaat aggcccatgt acaggaagcc caggatttat cggacgctga 360 gagggcccga cgttcccaaa ggctgtgaag gaccttgcaa ggtccagtct tacgagcagc 420 ggcacgatat cagtcatgtt ggtaaggtaa tgtgcatatc tgacgtgact cgtggcaacg 480 gtataacaca tcgtgtaggc aagcgcttct gcgtcaagtc tgtatatatt ttagggaaga 540 tatggatgga cgagaatatc aagttgaaga accatactaa cagcgttatg ttctggctgg 600 ttagagatcg tagaccgtat ggtactccta tggattttgg ccaagtgttc aacatgttcg 660 acaacgagcc tagtacagcc acggtcaaga acgatctccg cgatcggtac caggttatgc 720 acaagtttta cgctaaggta accggtggac agtacgcgag caacgagcag gcgttggtta 780 agagattctg gaaggtcaac aaccatgtgg tctacaacca tcaggaagca gggaaatacg 840 agaatcatac agagaacgcg ttgttattgt atatggcatg tactcatgca tctaaccccg 900 tgtatgcgac attgaaaatt cggatctatt tttatgattc gataatgaat taataaatat 960 taaattttat ttgatgatct tcgagtacat aatttacata tgaacggtct gttgcgaaac 1020 gcacagctct aataacatta ttaattccaa tcacaccaag cctatctaag tacaacatta 1080 ctaaatgtct aaagcgactt aaataagtcg tcccagaagc tcgaattgat gtcgtccaga 1140 cttggaagtt caggaaggct tggtgtagac tcagctcctt cctgaggttg tagttgaacc 1200 tgatttgtat gtggtatatt ctgacccatg tatgaggtgg atcctctact cggcacatct 1260 tgaaatagag gggatttgga acctcccaaa taaaaacgga attctctgcc tgagacgcag 1320 tgatgctctc ccctgtgcgt gaatccatta tccgcgcagt taatgtggag gtatatggaa 1380 cagccgcagt tcaagtcaat ccgtcgtcga cgtatggctc tcttcttggc aatcctgtgc 1440 tgtggcttga tagagggggg agttgaggaa gacgaattta gcatttttta atgtccaagc 1500 tttcagtgat gcattttcct ctttgtcgag gaaatattta taggaccccc cctctcctgg 1560 attgcacagc acgattgatg gaataccccc tttaatttga accggctttc catatttaca 1620 gttggactgc cagtcccttt gggccccaat caattccttc cagtgcttta gctttagata 1680 ttgcggattg acatcatcta tgacgttata ctccacttga ttggagtata ctttggaatt 1740 gaaatcgaga tgaccgctca gataattatg tgggcctaaa gcacgagccc acattgtctt 1800 gcccgttcgt gaatcccctt cgactatcaa actaatcggt ctctccggcc gcgcagcggc 1860 accccttcca aaataatcat ccgcccactc ttgcatctct tccgggacgt taacaaacga 1920 cgacagtgca aacgggggaa cccatggatc cgcagctttt ttaaagaggc gctcgatgtt 1980 agcccttaga ttatgataac tgacgataaa cgttttagga tcaccagcct ttataatgtc 2040 gagagcctct cccgcacttg ctgcattgac ggcgttgtgg tatacgtcat ctttattcga 2100 ctttgttccc ccagacacct tatattgccc ggattcacaa taatcgccgt ccttggtgat 2160 gtaattcttg acggcgttgg tgtctttggc tccttgaatg ttcgggtgaa aacaggttga 2220 ccgtctgggg tgagatatgt cgaaaaatct agcatccttg atgttggact tgccagataa 2280 ttgtatgagg cagtgtaagt gcgggaaccc atcgcgatgt tcctctcttg cgactctgat 2340 atacgtcggt ttgacgattg accaaggcag atgttgaata atctgaagaa cctcatcttt 2400 gggaacatcg cactgcggat atgttaagaa tatatttctg gcttgtaaac gaaatgaatt 2460 agggtttcgt ggcatttttg taattatgac ccaggactcc aagggagctc tctcacaaaa 2520 cctattgttg ttggagtcct ggagtcccat ttatacataa agtctctagg actccagagg 2580 ggcacgtggc ggccatccgc aataatatt 2609 //