ID DQ375456; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC DQ375456; XX DT 30-DEC-2006 (Rel. 90, Created) DT 30-DEC-2006 (Rel. 90, Last updated, Version 1) XX DE Alternanthera yellow vein virus segment DNA-A, complete sequence. XX KW . XX OS Alternanthera yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA He Z.F., Mao M.J., Yu H.; RT "Molecular characterization of begomovirus infecting Eclipta prostrata"; RL Unpublished. XX RN [2] RP 1-2745 RA He Z.F., Mao M.J., Yu H.; RT ; RL Submitted (24-JAN-2006) to the INSDC. RL Institute of Plant Protection, Guangdong Academy of Agricultural Sciences, RL Wushan Road, Tianhe District, Guangzhou, Guangdong 510640, P.R.China XX DR MD5; 79e8b5822aeefdf48aa4a61046920589. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Alternanthera yellow vein virus" FT /segment="DNA-A" FT /host="Eclipta prostrata" FT /isolate="G8" FT /mol_type="genomic DNA" FT /country="China" FT /db_xref="taxon:337826" FT gene 154..501 FT /gene="av2" FT CDS 154..501 FT /codon_start=1 FT /gene="av2" FT /product="AV2" FT /note="precoat protein" FT /db_xref="GOA:A1XI77" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:A1XI77" FT /protein_id="ABD35283.1" FT /translation="MWDPLLNPFPQTVHAFRCMLSVKYIQAVEDTYAPDTLGADLIREL FT IAVIRANNYVEACSRYDHFIKRIEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVESPHVS FT QAKVVPNVQKP" FT gene 314..1084 FT /gene="av1" FT CDS 314..1084 FT /codon_start=1 FT /gene="av1" FT /product="AV1" FT /note="capsid protein" FT /db_xref="GOA:A1XI78" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A1XI78" FT /protein_id="ABD35284.1" FT /translation="MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWS FT SRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHR FT VGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEP FT STATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENH FT TENALILYMACTHASNPVYATLKIRIYFYDSVMN" FT gene complement(1081..1485) FT /gene="ac3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="ac3" FT /product="AC3" FT /note="AC3 protein" FT /db_xref="GOA:A1XI79" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1XI79" FT /protein_id="ABD35285.1" FT /translation="MDSRTGEYITAAQAENGVYTWELTNPLYFKIIKHDSRPYLREHDI FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN FT VIRAINHVLWNALHHTLYVNFNHIIKFNIY" FT gene complement(1226..1630) FT /gene="ac2" FT CDS complement(1226..1630) FT /codon_start=1 FT /gene="ac2" FT /product="AC2" FT /note="AC2 protein" FT /db_xref="GOA:A1XI80" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A1XI80" FT /protein_id="ABD35286.1" FT /translation="MRPSSPSTSHCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISID FT CHNYGFTHRGVHHCSSGREWRVYLGTNQSPVFQDHQTRQQTIPTGTRHHYSSDTVQLQP FT AEGFGDTQMFSDLPDLDSLTTSDIEFLKGL" FT gene complement(1533..2618) FT /gene="ac1" FT CDS complement(1533..2618) FT /codon_start=1 FT /gene="ac1" FT /product="AC1" FT /note="Rep protein" FT /db_xref="GOA:A1XI81" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A1XI81" FT /protein_id="ABD35287.1" FT /translation="MRQPGQFRLNRKNFFLTYSQCPISKEEALQQLINTQTPVNKKFIR FT VCKELHEDGNPHLHALVQFEGKFCLTNPRFFDLQSPNSSAQYHCFITDAKSSSDVKAYI FT EKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGNKEQALDVVRELAPKDYVLQFH FT NLNANLERIFMPPPQEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWALKNATFVTINQPL FT YSGSHQSPTQASQEETSQTEG" FT gene complement(2171..2461) FT /gene="ac4" FT CDS complement(2171..2461) FT /codon_start=1 FT /gene="ac4" FT /product="AC4" FT /note="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1XI82" FT /protein_id="ABD35288.1" FT /translation="METLISMLLCNSKASSASRIRDSSTYSPPIPPPNTTASSPMRSPV FT QTLRHTSRRMETYLTGVPSRLMEGLQEGDSRQQTMLTQEQLTQAIRNRLLM" XX SQ Sequence 2745 BP; 706 A; 573 C; 639 G; 827 T; 0 other; accgatggcc aaaaaaaaat ttatgccggc cccacctggc agcttttgtc tgccactaga 60 caatcccgtc caatcagaat tgggcctgaa agcttaaata aaattggcgc cctctttaaa 120 tgcttggccg ctacgtttag tgcgctgtcc actatgtggg atccgctttt gaacccgttt 180 ccccagaccg tgcacgcctt tcgttgcatg ctttctgtaa agtatataca ggccgttgaa 240 gacacatacg ctcctgatac tttaggtgct gatttaatta gagagttaat tgcagtaatt 300 agggcaaata attatgtcga agcgtgcagc agatatgatc atttcatcaa gcggatcgag 360 ggtacgacgt cggctcaact tcgacagccc tatggctcgc cgtgctactg cccccattgt 420 ccgtgccact cgaaaacagc agtggtcgag tcgccccatg tatcgcaagc caaggttgta 480 ccgaatgtac agaagccctg atgtgcctta tggctgtgag ggtccgtgta aggtccagtc 540 atttgaaaaa aaacatgacg ttagtcatac tggtacgttg ttgtgtgtct ctgatgttac 600 cagaggtagt gggattacgc atagagtagg gaagcgtttc tgcatcaagt caatttacat 660 catagggaag atatggatgg acgagaacat taagtccaag aatcatacta acacggtcat 720 gttctggtta gttagggatc ggcgcccagt tacaacgcct tatggctttg gtgaggcgtt 780 taatatgtat gacaatgagc cctctaccgc aactatcaag aacgatctgc gtgatcgttt 840 gcaggtgtta cacaggtttt ctgccacagt tactggtggt cagtatgcgt ctaaggagca 900 ggctatgatc aagcgtttct ggaggattaa caaccatgtg gtttacaacc atcaggagaa 960 ggcagcttat gaaaatcata ctgagaatgc attaatattg tatatggctt gtactcatgc 1020 tagcaatcct gtgtatgcta cgctgaaaat tagaatatat ttctatgact ctgtaatgaa 1080 ttaataaata ttgaatttta ttatatgatt gaagtttaca tacaacgtat ggtgcaatgc 1140 attccatagt acatgattta ttgctctaat tacattgtta agacaaatta caccaagatt 1200 atctaaatac ttcataacct gggtcttaaa gacccttaag aaactcaatg tctgaggttg 1260 taagcgagtc cagatctggc aagtcagaaa acatttgtgt atccccaaag ccttccgcag 1320 gttgtagttg aactgtatct gaactgtaat gatgtcgtgt tcccgtaggt atggtctgct 1380 gtcgtgtttg atgatcttga aatacagggg attggttagt tcccaggtat acacgccatt 1440 ctctgcctga gctgcagtga tgtactcccc tgtgcgtgaa tccatagttg tgacagtcaa 1500 tggagatgta tagtgaacag ccgcaacgca gatcaaccct ccgtctgcga ggtttcctct 1560 tggctagcct gtgttggact ttgatgggaa cctgagtaca gtggctggtt gatggtgacg 1620 aaggtcgcat tctttagggc ccagtttttt agacctatgt ttttttcctc atcaaggaac 1680 tctttatagg aggatgtcgg accaggattg cagaggaaga ttgttgggat cccgccttta 1740 atttgaacgg gcttcccgta tttagtattg gactgccaat ccctttgggc ccccatgaat 1800 tccttgaaat gtttcacata gtgaggatct acatcgtcta ttatgttata ccaggcctca 1860 ttgctgtaaa ccctaggact aaggtcaata tgaccgcata ggtaattatg tggacctaat 1920 gatctagccc acattgtttt accagtcctg ctgtcacctt ctattactat acttattggt 1980 ctccagggcc gcgcagcggc agacatgaca ttgtctgcgg cccattcctc aatttcttca 2040 gggacctgat caaacgatga acaattaaaa ggactaatgt attcttgggg tggaggcatg 2100 aatatgcgct ccagattagc atttaaatta tgaaattgta atacataatc cttgggagct 2160 aactccctta ctacatcaag agcctgttcc ttattgcctg tgttaattgc tcttgcgtaa 2220 gcatcgtttg ctgtctgctg tccccctctt gcagaccttc catcaatctg gaaggtaccc 2280 cagtcaagta tgtctccatc cttctcgatg tatgccttaa cgtctgaact ggacttcgca 2340 tcggtgatga agcagtggta ttgggcggag gaattggggg actgtaggtc gaagaatctc 2400 ggattcgtga ggcagaactt gccttcgaat tgcacaagag catggagatg agggtttcca 2460 tcctcgtgta attccttaca aaccctaatg aatttcttgt ttactggggt ctgggtgttg 2520 attaattgct gtagtgcctc ttctttagag atagggcact gtgagtaagt gaggaagaag 2580 ttttttctat ttaatctaaa ttgcccaggc tgacgcatga tgacgtatct gttcacccga 2640 tgggtgctcc ttcaaaactc taagtcaatg ggtgaatggg tgcataatat atagtgggga 2700 tttttccgga ataaaaaatt tttttttggc catcgtacta atatt 2745 //