ID DQ356428; SV 1; linear; genomic DNA; STD; VRL; 2577 BP. XX AC DQ356428; XX DT 15-MAR-2006 (Rel. 87, Created) DT 15-MAR-2006 (Rel. 87, Last updated, Version 1) XX DE Sida mosaic Sinaloa virus isolate Sinaloa segment B, complete sequence. XX KW . XX OS Sida mosaic Sinaloa virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2577 RA Mauricio-Castillo J.A., Mendez-Lozano J., Arguello-Astorga G.R.; RT "Sida mosaic Sinaloa virus, a new begomovirus isolated from a weed with a RT complex infection"; RL Unpublished. XX RN [2] RP 1-2577 RA Mauricio-Castillo J.A., Mendez-Lozano J., Arguello-Astorga G.R.; RT ; RL Submitted (04-JAN-2006) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa San Jose 2055, San Luis Potosi, SLP RL 78231, Mexico XX DR MD5; 27fc401aac36f0b65bc01068ec6af995. XX FH Key Location/Qualifiers FH FT source 1..2577 FT /organism="Sida mosaic Sinaloa virus" FT /segment="B" FT /isolate="Sinaloa" FT /mol_type="genomic DNA" FT /country="Mexico" FT /db_xref="taxon:367850" FT gene 454..1224 FT /gene="BV1" FT CDS 454..1224 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="nucleus-cytoplasm ssDNA transporter; moves viral FT ssDNA between the nucleus and cytoplasm; NSP; BR1" FT /db_xref="GOA:Q20CK4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q20CK4" FT /protein_id="ABD36803.1" FT /translation="MYPVRFKRGVSFAGRRNYLRNNVFKRSTISRRDDGKRRSGNASKL FT NSEPKMTAQRIHENQFGPEFVMAHNSALSTFISYPCLGKTEPSRSRSYIKLKRLRFKGT FT VKIERVQSDMNMDGAIPKVEGVFSLVVVVDRKPHLGASGCLHTFDELFGARIHSHGNLS FT ITPSLKDRYYIRHVFKRVLSVEKDSVMVDVEGSTCLSNRRFNCWSTFKDLDRDSCNGVY FT ANISKNALLVYYCWMSDAVSKASSFVSFDLDYIG" FT gene complement(1242..2123) FT /gene="BC1" FT CDS complement(1242..2123) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="plasmodesmata modifier; cell-to-cell movement FT protein; BL1" FT /db_xref="GOA:Q20CK3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q20CK3" FT /protein_id="ABD36804.1" FT /translation="MESQLAFPPNAFNYIESQRDEYQLSHDLTEIILQFPSTASQFTAR FT LNRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTENESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTFKDVDFSHVDYGKWERKPIRCASMSRVGYRGPIEIRPGESWASRSAIGTGQSDAD FT SEAVNELHPYRHLSRLGSSVLDPGESASIVGARRAESNITMSMGQLNELVRNTVQECIN FT SNCKASRPKSLE" XX SQ Sequence 2577 BP; 639 A; 554 C; 579 G; 805 T; 0 other; accggatggc cgcgcgattt tcccccctcg cgcgaaagct atctacgtgc gcgcagctca 60 ttggtgccgt accctccagc tggtgtgcac tatcccccgc cccctccgct cctggtgccc 120 cctctacgtg gtgcctctct attggcgctc tccgtttatg atgggccata ttgtcagtga 180 gtaacgtccg atctggcttt aattcaaatt aaagttttag tcttttaagt cctgcgactc 240 gttgtttttt tgactactga ggcccatcgt ataatatcgt tgacgtggcc tgttttagac 300 cacgctgctg agtcaagtta acttcgaatt tgaactagct ttgtctatat catgggtgct 360 gcttatgatt tatattttga ggtgactcag ctgtcgtcca cgttagatta tgaccattaa 420 taacctcttt tgatcaagca ttatcacttg ataatgtacc cagttcgttt taagcgtggt 480 gtctcatttg ctggtcgacg taattatttg cggaataatg tctttaagcg ttcaaccatc 540 tctagacgag atgacggtaa acgacgatct ggtaatgcca gcaagcttaa tagcgagccc 600 aagatgacag cccaacgtat acatgagaat cagtttgggc ctgaatttgt aatggcccat 660 aattcagcct tgtctacgtt tatcagttat ccatgtcttg gtaagacaga accgagtcga 720 agcaggtctt atatcaagtt gaaacgcttg cgtttcaagg gtactgttaa gattgaacgt 780 gttcagtctg atatgaacat ggatggtgct attccgaagg tcgaaggagt attttctctc 840 gttgttgttg tggatcgtaa accccacttg ggtgcgtctg gttgtctgca caccttcgac 900 gaactattcg gtgccaggat ccatagccat ggaaacctta gcataacccc ttctctgaaa 960 gaccgttatt acataagaca cgtgttcaaa cgtgtattgt ctgtggagaa agatagtgtg 1020 atggttgacg tggaaggttc tacttgtctc tctaataggc gtttcaattg ttggtctacg 1080 tttaaggatt tggaccgtga ttcatgtaat ggtgtttatg ctaacatcag caagaacgcc 1140 ctattagtat attactgttg gatgtcagat gctgtgtcta aggcgtccag ctttgtatcg 1200 ttcgatcttg attatattgg ataattaata aaaatatatt tttattccaa cgatttgggc 1260 ctagaagcct tacaattact attaatacac tcttggaccg tattcctaac taattcgttc 1320 aactggccca ttgacattgt tatgttcgat tctgctctcc ttgctcccac tatagaagca 1380 gactctcccg ggtctaatac gctggagccc agcctactta ggtgtctgta tgggtgcaat 1440 tcgtttactg cctctgagtc cgcatctgat tgaccagtcc ctatagcact cctggaagcc 1500 catgactcac caggccttat ttcaattggg ccgcggtacc caactctcga catggacgca 1560 catctgatgg gcttcctttc ccattttccg tagtccacat gggaaaagtc gacatctttg 1620 aaggtgaact gtttggatag gatctttact gttggtgccc tgaacggaat gtccacggag 1680 tgtttcgccg tcgacaattt taatttccct ttgaatttcg cgaaatgggt cctctgatga 1740 acattcgtat cgcaaactct gtaatagagt ttccaaggaa ttgggtcttt gagcgaaaag 1800 aaagatgccg agaaatagtg gagatcgata ttgcatctga tcggaaaagt ccacgacgct 1860 tgcaacgact cgttttccgt cattctcttg tcatggatct ccacaatcac tgtccccgtc 1920 gcgttaattg gaacctgctg cctgtattct atgacacagt ggtcgatctt catgcagctc 1980 cgatttagcc tcgccgtgaa ctgtgacgcc gtcgaaggaa actgcaggat tatctcagtc 2040 agatcatgcg aaagctgata ctcgtctcgc tgtgattcta tataattaaa agcatttgga 2100 ggaaatgcta gctgagattc catctgaaaa agaaaggccg cgcagcggaa ctgatagctg 2160 aaattgaatt gttgattaag aaattagggt ttctttggga aaacacccga gcaacgaccc 2220 tttatgatga aaaggttttc tgggtttccc agaaatatgc tcaataattg aagaacaatt 2280 gtttaatctg tctttactgt gtgaaatgtt tttgagaaag gggagaattc tggtaaagaa 2340 ttcgaagtta attatgttat agatctgata gtctttatat aaacacccgc ttttgctgtt 2400 tgagaattgt ctgggaagtt ctatgagtgt tagtaatggc atatctgtaa atatgggtgt 2460 tcccccgata gctctctcgc tcaaaactca tatgaattgg gggaactggg ggaacatata 2520 tactaaaagt ctctgtgtag gatcttgcaa cacgtggcgg ccatccgcta taatatt 2577 //