ID DQ205236; SV 1; linear; genomic RNA; STD; VRL; 4126 BP. XX AC DQ205236; XX DT 31-JAN-2006 (Rel. 86, Created) DT 08-JUL-2006 (Rel. 88, Last updated, Version 2) XX DE Asian prunus virus 1 isolate Bungo Q1256-01 RNA-dependent RNA polymerase DE (RdRp) gene, partial cds; and triple gene block protein 1 (TGBp1), triple DE gene block protein 2 (TGBp2), triple gene block protein 3 (TGBp3), and coat DE protein (CP) genes, complete cds. XX KW . XX OS Asian prunus virus 1 OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus. XX RN [1] RP 1-4126 RX DOI; 10.1016/j.virusres.2006.03.004. RX PUBMED; 16621102. RA Marais A., Svanella-Dumas L., Foissac X., Gentit P., Candresse T.; RT "Asian prunus viruses: New related members of the family Flexiviridae in RT Prunus germplasm of Asian origin"; RL Virus Res. 120(1-2):176-183(2006). XX RN [2] RP 1-4126 RA Marais A., Svanella-Dumas L., Foissac X., Gentit P., Candresse T.; RT ; RL Submitted (13-SEP-2005) to the INSDC. RL Virology, GD2P, INRA, IBVM, University Bordeaux2, 71 Avenue Edouard RL Bourlaux, Villenave d'Ornon 33883, France XX DR MD5; b3e2e14da70d39e5f6d1bc73cac3c0cb. XX FH Key Location/Qualifiers FH FT source 1..4126 FT /organism="Asian prunus virus 1" FT /host="Prunus mume" FT /lab_host="Prunus persicae GF305" FT /isolate="Bungo Q1256-01" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:351427" FT gene <1..784 FT /gene="RdRp" FT CDS <1..784 FT /codon_start=2 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q2I7I3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q2I7I3" FT /protein_id="ABB42817.1" FT /translation="RFAPYMRYIEYKLQAVLPSNLYIHSGKNLEDLNEWVIRNKFSGMS FT TESDYEAFDSSQDHFILSFEIEIMKHLQLPWDLIEDYIYIKTHLGSKLGNFAIMRFTGE FT ASTFLFNTMANMLFTFLRYDLNGSEAICFAGDDMCANRRLRVSKRNENFLGKIKLKAKV FT QFTEKPTFCGWNLCMDGIFKRPQLVLERLCVAREKDNLANCLDSYAIEVGYAFALGERI FT LQYMDEEALQNHYSCVRFIIKHSHLLKSSVRDLFLGSM" FT gene 817..1536 FT /gene="TGBp1" FT CDS 817..1536 FT /codon_start=1 FT /gene="TGBp1" FT /product="triple gene block protein 1" FT /note="putative movement protein" FT /db_xref="GOA:Q2I7I2" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q2I7I2" FT /protein_id="ABB42818.1" FT /translation="MEFVYDKLIEVGYIRTIMQIDFPLIVHCVAGAGKSTLIREIIESD FT SKFEAFTYGVPDPVDLSGIRIRGAEELANARPDSLKIIDEYIGRHRPEGTVVCFADPNQ FT FPYSSPNAHFTCYQSKRFGDQTCAFLGKLDCAAFSYKSDQIIFETVFEGSIEGQIVCYE FT KEVFDLLDRHGADYKKDCQIRGSTFDVVTFITASETFRPEDRYKVYLCLTRHRSVLRIL FT SPEGKFLKDNAQFDTTA" FT gene 1511..1852 FT /gene="TGBp2" FT CDS 1511..1852 FT /codon_start=1 FT /gene="TGBp2" FT /product="triple gene block protein 2" FT /note="putative movement protein" FT /db_xref="GOA:Q2I7I1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q2I7I1" FT /protein_id="ABB42819.1" FT /translation="MPSLTPPPDHTKVFLPIAVGLGMGVVIWCLTRSTLPFVGDNVHSL FT PHGGNYLDGTKRISYCGPRDSFPSSNLFKGGTFPAICIVIILVTAIHVSELFNRPNRRT FT CGCGSAAHA" FT gene 1785..1982 FT /gene="TGBp3" FT CDS 1785..1982 FT /codon_start=1 FT /gene="TGBp3" FT /product="triple gene block protein 3" FT /note="putative movement protein" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q2I7I5" FT /protein_id="ABB42820.1" FT /translation="MYRSYLIGLIAALVAVALLHMLNSDRGGCLIVITGESVVVRNCVY FT TRDFIDLVRGLKPHSHWKSL" FT gene 2039..3244 FT /gene="CP" FT CDS 2039..3244 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q2I7I4" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q2I7I4" FT /protein_id="ABB42821.1" FT /translation="MSTSSATVVSDVSSTTSETLPATSGQNEPVVSQLDLPPVSSGVSG FT VSTAPSATTSSVENPFKPRTSFSLPSLTVGLGTLSATATSSTPAITSEAKTSSLESWKE FT RLKSKDKEPRYVLSDPENIGSFEAGGGSGPHGVNPSTMVYSKPEVKKGSDLEATGISLG FT AGQRMVFEAARKRAQANSEADKESLASPFASGDPFSRPKVQDVQRFPYEPSSPDVATAE FT NIEYIRADLVRAGVPTKDITFAMWDIARYCADAGSSESTEFVGTSSYGGRVARMEIAAV FT IKKHTTLRRFCGFYAKIVWNIMLVTNIPPSGWMKKGYEENTKFAAFDFFVHVSNNAALE FT PENGLVRKPYHEELVAAQVNKGVILHRTEAAQDKNASTAHEVTGGRAGPRSRLTLKGKE FT LD" FT 3'UTR 3245..4126 XX SQ Sequence 4126 BP; 1091 A; 864 C; 1014 G; 1157 T; 0 other; cagatttgct ccctacatga gatatattga gtataaactt caggctgtac tgcctagcaa 60 tttgtatatc cactctggga aaaaccttga agacttgaat gagtgggtca ttagaaacaa 120 gttctcagga atgagcacag aatctgatta tgaggctttt gactcaagtc aggaccactt 180 cattctgagt ttcgagattg aaatcatgaa gcacttacag ttgccatggg atctgattga 240 ggattatatt tatatcaaaa cccatcttgg ctccaagttg ggcaactttg ccataatgcg 300 cttcactggc gaagctagca cctttctgtt caacacgatg gcaaacatgc ttttcacttt 360 cttgaggtac gatctcaatg gttctgaggc aatatgtttc gctggggatg atatgtgcgc 420 aaatcggaga cttcgagtct caaagaggaa cgagaacttc ctgggtaaaa ttaagctcaa 480 ggctaaggtg cagtttacag agaagccaac tttttgcggc tggaatctgt gcatggacgg 540 aatcttcaag aggccacaac tggtgcttga gcggctatgt gtggcaaggg agaaggacaa 600 ccttgctaac tgcctggact cttatgccat agaggttgga tatgcttttg ccctaggtga 660 aagaattttg caatacatgg acgaggaggc ccttcagaat cattatagct gcgtgcgttt 720 cattatcaaa cactctcatt tattgaagtc cagtgtccgc gacctctttt taggaagtat 780 gtagattagg tttaacattg tgttatgtga ataagtatgg aatttgtata tgataagtta 840 atagaagtag ggtacattag aactatcatg cagattgatt tccctttgat tgtgcattgt 900 gttgctggcg caggaaaaag caccctcatt cgtgagatta ttgaatcgga tagcaaattt 960 gaggctttta cttacggagt gccggatccg gtagatttgt ctgggattag aattcgaggg 1020 gctgaggaac ttgctaacgc aaggccagat tcccttaaaa tcattgacga atatattggg 1080 cgacacaggc ccgaaggcac cgtagtttgt ttcgctgatc caaatcagtt tccgtattcc 1140 agcccaaacg cgcacttcac ctgctaccaa tctaagcgct ttggtgacca aacttgtgca 1200 tttctcggca agctggattg tgcagccttc tcctataagt cagaccaaat tatatttgag 1260 actgtctttg agggatcaat tgaaggtcaa attgtctgtt acgagaaaga ggtcttcgac 1320 ttgttagaca ggcacggagc tgattacaag aaagattgtc aaattagagg ttcaaccttt 1380 gacgttgtta cttttatcac agcctctgag acgttcaggc ccgaggacag atacaaagtc 1440 tatctctgtc tcacaagaca tcgttcagtg cttcgaattc taagcccgga agggaaattc 1500 ctcaaggaca atgcccagtt tgacaccacc gcctgatcac acaaaggtgt ttttgccaat 1560 cgcagtaggc cttggaatgg gcgtcgttat ttggtgtttg accaggtcaa ctctgccctt 1620 tgtcggtgac aacgttcata gcctccctca cggtgggaat tacctggacg gaacaaagcg 1680 aattagttac tgcggtccga gagacagctt cccaagtagc aaccttttta agggtggaac 1740 ctttcctgca atttgcatag ttataatttt ggttactgcc atccatgtat cggagttatt 1800 taataggcct aatcgccgca cttgtggctg tggctctgct gcacatgctt aattctgatc 1860 gtggtggttg tttaattgtg atcactggtg agtccgtcgt agttaggaat tgtgtgtaca 1920 cgcgtgactt tatagactta gtcagaggtc ttaaaccgca tagccattgg aagtcactgt 1980 agttaggtcg agtgtatgta ttttgaaata atagaacttt acctgtataa acataaagat 2040 gagtacctct tctgcaacag ttgtttctga tgtgtcaagc actacttctg agactcttcc 2100 cgctacttct ggccagaatg agcctgttgt ttcacagctt gatcttccac cagtttcctc 2160 tggggtatct ggagtttcca cagctccatc tgctaccacc tcaagtgttg agaatccatt 2220 caagcctagg acttcgttct cactaccatc gttgacggtt gggcttggaa cccttagtgc 2280 gactgcaaca agctcgacac ctgctatcac gtctgaagct aagacctcct cacttgaaag 2340 ttggaaagaa aggctgaaaa gcaaagataa ggagcctagg tacgtattgt cagacccaga 2400 gaatattggc tcttttgaag ctggtggtgg atcagggccg catggagtta accccagcac 2460 catggtttat tccaaaccag aggtgaaaaa gggctcagac cttgaggcga ctgggataag 2520 cctgggtgcg ggacagcgga tggtgtttga ggcggctagg aagagggccc aggccaactc 2580 ggaagcggac aaggagagtt tggcatcacc ttttgcttca ggagaccctt tttccagacc 2640 gaaagtccag gatgtgcaaa ggttcccata tgagccgagt tctccggacg ttgcaacagc 2700 tgaaaacatt gagtacataa gagctgactt ggttagagct ggagtgccca caaaggacat 2760 aacttttgct atgtgggaca ttgcccgcta ctgcgctgat gctgggtctt ctgaatccac 2820 tgagtttgtt ggaacaagca gttatggagg tcgggtcgct agaatggaaa ttgcagcagt 2880 aatcaagaag cacacaacac tgaggaggtt ttgtggcttt tacgccaaaa tagtctggaa 2940 tatcatgctg gtgacgaaca ttccaccctc agggtggatg aaaaagggct acgaagaaaa 3000 cacgaagttc gctgcctttg acttctttgt gcatgtttca aacaacgctg ccttggaacc 3060 agagaacggg ttggttagaa agccatatca tgaggagctg gttgctgctc aagtcaacaa 3120 gggtgttatt ttacatcgaa ctgaggccgc tcaagataaa aacgcttcga cagcccatga 3180 ggtcacaggc ggtagagctg gaccacgctc gaggttgacc ttaaaaggga aggagctgga 3240 ctgagagttt caatcgagtg atgaaatttg ctgttgtttg actttgctac tttcaactat 3300 atttaattta aaataagtgt ctagtttcgg cctagaaccg tggagaggcc taaaagagtc 3360 cacgtgccgt cttagaacct tagtgtgtgt cttagtaaat attagtagtt tccacttcct 3420 taggttccag gtctagaacc caggagagac ctgaaagagt cctggtaggc gtttagccat 3480 gatgcacctc tgcaccgcat aggccacacc aacgtcaatc attgtgtgcc ttatgtgggc 3540 aagttaaccg tgttgtagcg gcaaccggga atgtaagatg caagcgtaga tttatgagct 3600 acgccctgtg gttggatttc caccgttacc tcgtcgttaa gaaggtgacc cctcttctct 3660 cgcttatggg ggtattgtta agcgagcgtg cgactcgttg aaagatgggt tccctacgtt 3720 aagggtagtt gtggtttaga ataaacctcc atggctccga cctgccatga ttaaagcgat 3780 cggtagttct gggtaagaag caaccctgtg cttggtggct aagcatgacc actcagtttg 3840 accaactggc cagacaggtt acgtttccca tttcgatatc aaaagtgggc gcataacaaa 3900 gcgttaaatt gttcttctgc acgtttcaat ctttcattat ttgaaggttt gaaataggct 3960 ttagtcctgg tgatctgact ttaaaagagc caaataaacc gcatttcaac gcgttatagt 4020 gttcgctgac agaccgtacg agtagtctgt ctcaccaacc taagacctaa ataattgaat 4080 aaggggaagt gattaaacaa atttgctttt tatcgctaat ttttgc 4126 //