ID DQ092436; SV 1; circular; genomic DNA; STD; VRL; 7722 BP. XX AC DQ092436; XX DT 12-JUL-2005 (Rel. 84, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 4) XX DE Banana streak virus Acuminata Yunnan, complete genome. XX KW . XX OS Banana streak virus Acuminata Yunnan OC Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus. XX RN [1] RP 1-7722 RX DOI; 10.1007/s12250-011-3212-y. RX PUBMED; 22160939. RA Zhuang J., Wang J.H., Zhang X., Liu Z.X.; RT "Molecular characterization of Banana streak virus isolate from Musa RT Acuminata in China"; RL Virol Sin 26(6):393-402(2011). XX RN [2] RP 1-7722 RA Zhuang J., Liu Z.-X.; RT "Cloning the complete genome of a new Banana streak virus isolate and coat RT protein gene identification"; RL Unpublished. XX RN [3] RP 1-7722 RA Zhuang J., Liu Z.-X.; RT ; RL Submitted (13-JUN-2005) to the INSDC. RL State Key Laboratory for Tropical Crop Biotechnology, Chinese Academy of RL Tropical Agricultural Science, Cheng Xi Road, Haikou, Hainan 571101, China XX DR MD5; 32d17bb250d7bb29d0b70933b1e49e1e. XX FH Key Location/Qualifiers FH FT source 1..7722 FT /organism="Banana streak virus Acuminata Yunnan" FT /host="plaintain" FT /isolate="Acuminata Yunnan" FT /mol_type="genomic DNA" FT /country="China" FT /db_xref="taxon:334778" FT CDS 666..1196 FT /codon_start=1 FT /product="ORFI" FT /db_xref="InterPro:IPR010746" FT /db_xref="UniProtKB/TrEMBL:Q4FCW5" FT /protein_id="AAY99425.1" FT /translation="MESYWDLEFEKYKNSHSKAISDLSYLDLATAEKVSNKDLAFNLHI FT NTYRSDLGFKVAIHSLSKNRELLIQNRKLLEEQKQQLSEINNLSKVVRLQRADLKETLK FT RQDVLAKELQALRKDYLERRPLSKEDVEELVVRISEQPKFIEKQTEALTIELTKEVNTL FT KSIIKDFEQRLLG" FT CDS 1193..1591 FT /codon_start=1 FT /product="ORFII" FT /db_xref="UniProtKB/TrEMBL:Q4FCW4" FT /protein_id="AAY99426.1" FT /translation="MNLAESKATAVYQEALQSTAAGWEDLGIGFTDKGIISTTTLSRQL FT NSLLFLVVKQNQQISTISEESTQLHNRVKNLEGKTGTSASPLYKSEIESINDKLKRIQE FT VQRSLPPKETPSGVIKVFEDPYHILRRL" FT CDS 1591..7293 FT /codon_start=1 FT /product="ORFIII" FT /db_xref="GOA:Q4FCW3" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR002156" FT /db_xref="InterPro:IPR018061" FT /db_xref="InterPro:IPR021109" FT /db_xref="InterPro:IPR036875" FT /db_xref="UniProtKB/TrEMBL:Q4FCW3" FT /protein_id="AAY99427.1" FT /translation="MASRPRVSGSTTRTMVAEPGVPLVDDQIREYRTAARAAYEAQRIA FT RRTGNIIGRIVGRQPREHTLAMVVDPNSELERSLAHRARTIPAEVLYMTQRGEPTNRVY FT RNRTEERMLVTHGQQDRTFILPESYEELREAGFEYIHLGVLQVRIQIMHRSYAGTMALV FT VFRDTRWTQENHQGRSIIATMEADLSQGHQLIYVIPDIMMTIRDFYQHIQISILTKGYE FT GFQGEANLLITRSCRCRLSNVPNVGFQYNIQNVVEFLKSKGVKALNATKLSTRRFQGSE FT WNIRPSEVVVPMQPTTMIVRVNYDSSRSIRFGDYEASTSSSAPKYEQDGDEDEALGDIH FT QVNMITIIEDDAEDDYPRLSALERIIAPESMVGEEDTIAEFLGNLSLDSSTDGEFYDAD FT NSLFEEEEYDGDDDSEVSTPRSKYNIFALEDEYPKLQQLESLVLSTTESAISRFRPTDT FT DMTGIGPAYAPATGTAGYTGASSSDFPYPRRPRKWDNNSEWFNLPTANARQASIFVMPQ FT DFDTKVFERWESSVLLHMSDKVFDDPQDKLTYVENLLGESEKKMFITWRMMFTAEYEEM FT KNNALGSNGTQNILNQIRMIFFLENPQVGTTNTQDAAYKTLKQLVCTEMSGPAIYRYLN FT DYFHLAAKSGRAWASDELSKEFFTKLPKGLGDRVEKEFKKRYPNNTIGVAPRITFTRNY FT MKEICQEAVFQSQLKKLDFCKGTPVHGLYGKDKAYGRKYGVRKSTSYKGKPHKSHVRID FT KKKHLLMKRKDCKCFACGDVGHFASECPNPKKLMHRVQILQSLELDDGIDVISVGFDES FT DVSDIYSVSEGEDNYQFNNEDFDVIGHDVFMFTIEEQRNCLVETTSAWRSAMKVTSEEK FT NCLHTWSFEEKTSDYCRACKNRALQGSRADCTQCKMIICSLCKPYYFQDGSPIPAQGST FT PSGYSHDDWMGSANRWKAHYEFSQARRKSLKADLEKAEEELKFYKQKEKERARLKNQIP FT EAIQAKLDDLEREKELNNILRIEAEAELKALKESFKEREEALMGEITALEEGVKVHKEE FT AEELQEENQKLKEKILAFEKEAVQESEEVIELVNNVEEHLVLTGQQKNNLLNIKITLEI FT KEKKITMNAILDTGAAICVCDGNMVDEYFRRPSMMNAFIKGVNGITNVKEILEEGKIWI FT GNQWFRIPRTYIMPQLSEGLHFIIGMNFIRAMEGGIRIEQGMVTFYKMVTQAQAPPMVH FT DISYLEELELELPIYYDICATNPSGGEINSDLIPPSEIQKLKDLGYIGEEPLKHWAKNQ FT VKCKIEIKNPDLIIEDRPLKHVTPAMKESMKKHIDKLLELKVIRPLTSKHRTTAIIVQS FT GTEIDPLTGKERRGKERLVFNYKRLNDNTEKDQYSLPGINTIISRIGKSKIYSKFDLKS FT GFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEEYIAVYI FT DDILIFSDNVSDHRKHLSKFLEICKANGLVLSPTKMKIGAREIDFLGATIGNSRIKLQP FT HIIKKIIETKDEELKETKGLRKWLGVLNYARAYIPNLGKTLGPLYSKTSVNGEKRMNSQ FT DWKVVQLIKNQVQNLPDLDIPPAGATMVLETDGCMEGWGGVCKWKLHPSDTRLAEKVCA FT YASGRYHPIKSTIDAEVHAVINSLEKFKIYYLDKKELIIRTDSQAIVAFYKKQADHKPS FT RTRWLMLIDYITGLGINVKFEHIDGKENVLADTLSRLVQVLITRVHHPAETQLVEAVME FT VLSNPKKEALDKVNHFIFLTQQWIAEQRKEHMVNTLLQLEEPQLHCGCKDHTTGERRNA FT VLLQSHTSANPYRWFYKCAQDRCHTWIWKDILDQYAEDYAAYTRIGLEALSLEDWFEEP FT EPDPPDPVDRQKIEDILDLQDVSNDD" XX SQ Sequence 7722 BP; 2563 A; 1620 C; 1777 G; 1762 T; 0 other; tggtatcaga gcaaggtttt ctgtaagtaa ttttatggct ttcatggggt aaaaccctta 60 gataggagcc taagggctct gctatgcttt gtttatgaaa atagttgtgc aagtagaaaa 120 tgcatgataa atcgaataag ttcttataaa tggtccggaa atttatgaaa ttatcctttt 180 ctcctcaagg gaaactttct gtgtttccaa gcttcactga gatgatactt attcatagga 240 aacagtagct tggttaaggg aaggaaaaat gagttgagtt gggagtggaa ctctctaggg 300 attggaggca aaagaaccgg aaccttaccc agtaggtaag tcccgcggaa gggcagtaag 360 ctggagaacc ccggtgtgag cttctttacc ttagaaaagc tgtgctctag tatcctcaaa 420 accacgcgaa gtacttccca aagctatgtt actaattttt gtgaatatct atcagatcac 480 gatcaagctt gagctatgca ggagagaact tgggaataat tggatgacta atgatcaagg 540 gcctttacta agagcttagt aagaagtaag tgcataagac tacctctgga actgactatg 600 atcataaaca agcatatgta tcccgaaggg tactcctatc tgtcttaaaa ccataagaaa 660 cctctctgga atcctattgg gatcttgaat ttgaaaaata caaaaattct cattctaaag 720 ctatttctga tctttcttat ttagatttag ccactgctga gaaggtctct aataaggacc 780 ttgcatttaa tttgcatata aatacctatc gtagtgatct tggctttaag gtcgcaattc 840 actctttatc caaaaatcgt gagctgctaa tccagaacag gaagctcttg gaggagcaga 900 agcagcagct ttctgaaatc aacaaccttt ccaaggttgt gcgtctccaa cgcgccgacc 960 tgaaggagac tctaaagcgt caggacgtcc ttgcgaagga gcttcaagct cttcgtaaag 1020 actatctgga gagacgccct ctcagcaagg aggacgtgga ggaattggtt gttaggatct 1080 cagaacaacc aaagtttatt gaaaaacaaa ctgaggctct cactatagag cttacaaaag 1140 aagttaatac attaaagtcc atcatcaagg actttgagca gaggctcttg ggatgaacct 1200 agctgaaagc aaggcaactg ctgtatatca agaagccttg caatctactg ctgccggttg 1260 ggaagacctc ggcatcggat tcactgacaa gggaatcatc agcacaacaa ccttgtcaag 1320 gcagcttaac tcgctgttat tcttggtggt caagcaaaat cagcaaattt ccaccatttc 1380 tgaagaatca acccagctcc acaaccgggt taaaaattta gaaggaaaga cagggacatc 1440 tgcaagtccc ctgtacaaat ctgaaattga atccattaac gacaagctca aaaggattca 1500 agaagtccaa aggagtttac caccaaagga gaccccttcc ggagttatca aagtctttga 1560 ggatccctac catatcctca ggagactata atggcatcca gaccaagagt ctccgggagc 1620 accacccgaa ccatggtggc agaaccaggg gttcccctgg tagatgacca aatccgggaa 1680 taccggacag cggcccgtgc cgcatatgaa gcgcaaagga ttgccagacg tactggcaac 1740 atcattgggc gaattgttgg acgacaacca agggagcaca cccttgcaat ggtcgtggac 1800 cccaacagtg agctggaacg ctcactggct caccgggcac gaacaatacc cgctgaagtc 1860 ctctacatga cccagcgcgg tgagcctaca aatcgggtct accggaacag aactgaggaa 1920 aggatgctcg tgactcatgg gcaacaggac aggaccttca tcctaccaga gtcatacgaa 1980 gagcttcgag aagctggatt tgagtatatc catctaggag tactccaggt gcgcatccaa 2040 atcatgcacc gttcctatgc tggtacgatg gcattagtgg ttttcagaga caccaggtgg 2100 acacaggaaa accaccaggg cagatccatc atagcaacca tggaagctga cctttctcaa 2160 gggcatcagc ttatttatgt catcccagac ataatgatga caatccggga tttctaccag 2220 cacatccaga tcagcatcct taccaaagga tatgaaggtt ttcaaggaga agcaaatctc 2280 cttattacaa gaagctgtag gtgcagatta agcaacgttc ctaacgtcgg cttccaatac 2340 aacattcaga acgtcgtgga attcctgaaa tctaagggtg taaaagccct aaacgcaaca 2400 aagttaagca ccaggaggtt ccaaggaagt gaatggaaca tccgaccatc agaagtggtg 2460 gtccccatgc aacctacaac catgatagta cgagtaaatt atgactcgtc aagaagcatc 2520 agattcgggg attacgaagc cagcacatca tcatcagccc caaaatatga gcaagacggt 2580 gatgaagatg aagcacttgg tgatatccac caagtaaata tgatcaccat cattgaagat 2640 gatgcagaag atgactaccc acggttatca gctttagagc gaataatcgc tccagaaagc 2700 atggtgggag aagaggacac aattgccgaa tttttaggca atctgtcctt agattcctcc 2760 actgatgggg aattctatga tgctgacaat tcgttatttg aagaagagga atatgatgga 2820 gatgatgatt ctgaagtcag cacaccaaga agcaaatata acatatttgc gctagaagat 2880 gagtacccaa aacttcaaca gctggaaagc ttggtactct ccacaactga gtctgctatc 2940 agtcgtttca ggccaacaga cacggacatg actggcatag gccccgctta tgcaccagca 3000 acaggaacag ctggctatac tggagccagt tcatctgatt tcccttaccc aagaagacca 3060 aggaagtggg ataataattc agaatggttc aacctgccca ctgctaatgc gaggcaagca 3120 tcgatattcg tcatgcctca ggacttcgac acaaaagtct ttgaaagatg ggaaagttcg 3180 gttctccttc acatgtctga caaggttttc gatgatccac aagacaaact aacttatgtg 3240 gaaaacctgc taggagaatc agagaaaaag atgttcatca cttggaggat gatgttcaca 3300 gctgagtatg aagaaatgaa gaacaacgct ctcggctcaa atggaactca aaatatcctg 3360 aaccaaatca ggatgatatt ctttctggaa aatcctcaag tcggaacaac caatactcag 3420 gatgctgcat acaagactct caaacaattg gtatgcacag aaatgtcagg acctgcgatc 3480 tacaggtatc tcaacgacta cttccattta gctgctaaat ctggaagagc atgggcatcc 3540 gatgaattat ccaaagagtt cttcacaaaa ctgccaaaag gattgggaga cagagttgaa 3600 aaggaattta agaaaagata ccccaacaat accattggag tggcacccag aattaccttc 3660 acaaggaatt acatgaagga aatatgccaa gaagctgtat tccaaagcca actgaagaaa 3720 ttggatttct gcaaagggac acctgtccat ggcttatacg gaaaagacaa ggcatatggg 3780 aggaaatacg gggtcaggaa aagcacctcg tacaaaggaa agcctcacaa gtcacatgtg 3840 aggatagaca aaaagaagca ccttctgatg aaaaggaagg actgcaagtg ctttgcttgc 3900 ggagatgtcg gccactttgc atcagagtgt ccgaatccca agaaattgat gcacagagtt 3960 cagatcctac aatcgctgga acttgatgac ggaatcgatg tgatctccgt aggatttgat 4020 gagtcggatg tctcagacat ctactcggta tctgaaggcg aggacaacta ccagttcaat 4080 aatgaggatt tcgatgtcat aggacatgac gtgttcatgt tcactattga agaacaaaga 4140 aactgcctgg tagaaaccac gtcagcttgg aggagcgcga tgaaagtcac ttctgaagaa 4200 aagaactgct tacacacatg gagctttgag gaaaagacat cagattactg cagggcatgc 4260 aagaatcgag ccctacaagg aagcagagct gactgcactc agtgtaagat gatcatttgc 4320 tctttatgca aaccatatta tttccaggat ggctcaccta tcccagcaca aggatcgacc 4380 ccctcaggat actcccacga tgattggatg ggatcagcaa ataggtggaa ggcacactat 4440 gaattttctc aggcaagaag gaaaagcctg aaggcagacc tggaaaaggc agaagaagag 4500 ctgaaattct ataaacaaaa ggaaaaagaa agagccagat tgaagaatca aattccagaa 4560 gcaatacaag caaaacttga tgatctggaa agagaaaagg agctcaacaa tattctaaga 4620 atagaagcag aagcagagct aaaggcactt aaagaaagct ttaaagagag ggaagaagct 4680 ctgatgggag aaattacagc cttagaagaa ggagtaaaag tacacaaaga ggaggctgaa 4740 gaacttcaag aagaaaatca gaagctcaag gaaaagatcc tagcctttga aaaggaagca 4800 gtacaagaat cagaagaagt gatcgaacta gtcaacaatg ttgaagaaca tctggtgttg 4860 actggacaac agaagaacaa tctcctcaac atcaagataa ctttggagat caaggagaaa 4920 aagatcacca tgaacgcaat actagacaca ggagcggcaa tttgtgtctg tgatggaaat 4980 atggtggacg aatacttcag aagaccatct atgatgaacg cgttcataaa gggagtcaac 5040 gggattacca acgtcaaaga aattctagaa gaagggaaga tctggattgg taatcaatgg 5100 ttcagaatcc caaggacata tatcatgccc cagctatccg aaggtcttca tttcatcatc 5160 gggatgaact tcatcagggc aatggaagga gggattcgaa ttgagcaagg aatggtaacc 5220 ttctacaaaa tggttacgca agcacaggca ccccctatgg tacacgatat ttcttacctt 5280 gaggaattag aacttgaatt gcctatctac tatgatattt gtgcaactaa cccctcagga 5340 ggagaaatca acagtgacct aataccccct tcggaaatac agaagctaaa ggatttaggc 5400 tacattgggg aagagccctt gaagcactgg gctaagaatc aggtcaagtg caagattgaa 5460 ataaaaaatc ctgatctgat aatcgaggac aggccactaa agcatgtcac cccagcaatg 5520 aaggaatcaa tgaagaagca tattgataag ctgctagagc tcaaggtgat caggcctttg 5580 acgagtaaac accggacaac tgctataatt gtccaatccg gtacagaaat tgaccccctc 5640 actgggaagg aaagaagagg gaaggagagg ctggtattca actacaaacg cctcaatgac 5700 aatactgaaa aggatcagta ttcactaccc ggtatcaaca caatcatcag cagaatcggc 5760 aagtcaaaaa tctacagcaa atttgacttg aaatcgggtt ttcatcaggt ggccatggat 5820 ccagaaagca tcccatggac agccttttgg gccatagatg gactttatga atggctggtc 5880 atgccatttg gactaaagaa cgcgcctgcc atatttcaga gaaagatgga caactgcttc 5940 cgaggaacgg aagaatacat agcggtatac atcgatgaca tcttaatatt ctctgataat 6000 gtttctgatc acaggaagca cctgtcaaag ttcctggaga tttgcaaggc aaatgggctg 6060 gtcctaagcc caacaaagat gaaaattggc gcaagagaaa ttgattttct gggagcaaca 6120 attgggaatt ccagaattaa gctccaacca cacataatta agaagattat tgagacaaag 6180 gatgaggagc ttaaggaaac aaagggactc aggaaatggc tgggagtcct taactatgca 6240 cgggcatata ttccaaatct gggaaaaact ttaggcccgc tctactccaa gacatccgtt 6300 aatggagaaa agagaatgaa cagccaggac tggaaggttg ttcagctgat caaaaatcag 6360 gtacaaaatt tacctgacct tgacataccc cccgcaggag caacgatggt cctagagact 6420 gacgggtgta tggaaggatg gggaggagtg tgcaaatgga aactccatcc ctctgacact 6480 aggctggcag aaaaggtctg tgcatatgcc agtggaagat accatcccat caagagcact 6540 attgatgcgg aggtccatgc agtgatcaac agcttggaaa aatttaagat ctattatctg 6600 gataaaaagg agttgatcat aagaacagac agccaggcca ttgtagcctt ctacaagaag 6660 caagcggatc acaagccttc aagaacgaga tggcttatgt tgattgatta cattactggg 6720 ctcggaatca acgttaaatt tgagcacatt gacggaaaag aaaatgtcct agctgacact 6780 ttatcaagat tggtccaagt tctaatcaca agggttcatc atccagcaga gactcagcta 6840 gttgaagccg tcatggaagt cctgagcaat ccgaaaaagg aagccttgga taaggtaaat 6900 cattttatct ttctaaccca acaatggatt gcagaacaaa gaaaggagca tatggtgaac 6960 acactgctcc agttggaaga acctcaacta cactgcggct gcaaagatca cacaacagga 7020 gaaagaagga acgccgttct tctccaaagt cacacctcag ccaacccgta tagatggttc 7080 tataagtgtg cacaagacag atgtcacact tggatttgga aggacatcct ggaccagtat 7140 gctgaagatt atgccgctta caccaggatt ggacttgagg cacttagcct tgaagactgg 7200 ttcgaagaac cagaacccga tccacctgac ccagtggacc gccagaagat agaagatatc 7260 ctggacctgc aagatgtcag caatgacgat tgaaagattc ccaggatagc cggcggacgt 7320 ggtggaccca gtctaggtgc gatgcttagt cacgcacgat gactctgtcg gaaggcatct 7380 ttactttcgg caaactttaa taatacttta ggaaaagtat tgtacaagtt aggtgcagaa 7440 tcaataatgc acccagcttt agtcttgtct actgaattat tgtgtcggtt gcattattgg 7500 atgcctgcgt gcaccctaag caatccccgg ctctcatctc tataagagga gcctttgtat 7560 tcagttgcaa gcatgcaagt cacacactgc aagcttactt ctgagcaaaa agagttttga 7620 gtgaaataaa tttgaagttc ccccttacat cttatgttct tgaaaggttt gatctaatca 7680 agcgagtaga gaacaagatc ttttgggatt tccgcgcata ca 7722 //