ID DQ079883; SV 1; circular; genomic DNA; STD; PHG; 5386 BP. XX AC DQ079883; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage ID45, complete genome. XX KW . XX OS Enterobacteria phage ID45 OC Viruses; Microviridae; Bullavirinae; Sinsheimervirus; OC unclassified Sinsheimervirus. XX RN [1] RP 1-5386 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-5386 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; e9f39ee9a5042ad71d3fa0c0b809b6fc. XX FH Key Location/Qualifiers FH FT source 1..5386 FT /organism="Enterobacteria phage ID45" FT /mol_type="genomic DNA" FT /db_xref="taxon:338114" FT gene join(3981..5386,1..136) FT /gene="A" FT CDS join(3981..5386,1..136) FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LLY8" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LLY8" FT /protein_id="AAZ49093.1" FT /translation="MVRSYYPSECHADYFDFERIEALKPAIEACGISTLSQSPMLGFYK FT QMDNRIKLLEEILSFRMRGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNV FT LPQLDINNTIDHRPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYDYPKKKGIKDE FT CSRLLEASTMKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRD FT YFRDIGRMVLAAEGRKVNGSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPSGSVDPN FT FGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAV FT GFYVAKYVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTN FT LSMECLIQLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRA FT SIKMIGVSNLQNFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK" FT gene join(4497..5386,1..136) FT /gene="A*" FT CDS join(4497..5386,1..136) FT /codon_start=1 FT /transl_table=11 FT /gene="A*" FT /product="gpA*" FT /function="shuts off host DNA synthesis" FT /db_xref="GOA:Q2LLY7" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LLY7" FT /protein_id="AAZ49094.1" FT /translation="MKSRRGFTIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNP FT NALRDYFRDIGRMVLAAEGRKVNGSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPSG FT SVDPNFGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKAT FT SYMAVGFYVAKYVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKM FT LTMTNLSMECLIQLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLL FT KFMRASIKMIGVSNLQNFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGG FT K" FT gene join(5075..5386,1..51) FT /gene="B" FT CDS join(5075..5386,1..51) FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LLY6" FT /db_xref="InterPro:IPR003513" FT /db_xref="InterPro:IPR038149" FT /db_xref="UniProtKB/TrEMBL:Q2LLY6" FT /protein_id="AAZ49095.1" FT /translation="MEQLTKNQAVATSQEAVQNQNEPQLRDENAHNDKSVHGMLNPTYQ FT AGLRRDAVQPDIEAERKKRDEIEAGKSYCSRRFGGATCDDKSAQIYARFDKNDWRIQPA FT EFYRFHDAEVNTFGYF" FT gene 51..221 FT /gene="K" FT CDS 51..221 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="InterPro:IPR020962" FT /db_xref="UniProtKB/TrEMBL:Q2LLY5" FT /protein_id="AAZ49096.1" FT /translation="MSRKIILIKQELLLLVYELNRSGLLAENEKIRPILAQLEKLLLCD FT LSPSTNDSVKN" FT gene 133..393 FT /gene="C" FT CDS 133..393 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LLY4" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LLY4" FT /protein_id="AAZ49097.1" FT /translation="MRKFDLSLRNSRSSYFATFRHQLTILSKTDALDEEKWLNMLGTFV FT KDWFRYESHFVHGRDSLVDILKERGLLSDSDAVQPLIGKKS" FT gene 390..848 FT /gene="D" FT CDS 390..848 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LLY3" FT /db_xref="InterPro:IPR004196" FT /db_xref="InterPro:IPR036632" FT /db_xref="UniProtKB/TrEMBL:Q2LLY3" FT /protein_id="AAZ49098.1" FT /translation="MSQVTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIA FT TDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM" FT gene 568..843 FT /gene="E" FT CDS 568..843 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LLY2" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LLY2" FT /protein_id="AAZ49099.1" FT /translation="MVRWTLWDTLAFLLLLSLLLPSLLIMFIPSTFKRPVSSWKALSLR FT KTLLMASSVRLRPLNCSRLPCVYAQETLTFLLTQKRMSAKNYAQKE" FT gene 848..964 FT /gene="J" FT CDS 848..964 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LLY1" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LLY1" FT /protein_id="AAZ49100.1" FT /translation="MSKGKKRSGARPGRPQPLRGTKGKRKGARLWYVGGQQF" FT gene 1001..2284 FT /gene="F" FT CDS 1001..2284 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LLY0" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR037002" FT /db_xref="UniProtKB/TrEMBL:Q2LLY0" FT /protein_id="AAZ49101.1" FT /translation="MSNVQTGAERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMD FT AVGALRLSPLRRGLAIDSTVDIFTFYVPHRHVYGEQWIKFMKDGVNATPLPTVNTTGYI FT DHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNELNQDDARYGFRC FT CHLKNIWTAPLPPETELSRQMTTSTTSIDIMGLQAAYANLHTDQERDYFMQRYRDVISS FT FGGKTSYDADNRPLLVMRSNFWASGYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEH FT GTMFTLALVRFPPTATKEIQYLNAKGALTYTDIAGDPALYGNLPPREISMKDVFRSGDS FT SKKFKIAEGQWYRYAPSYVSPAYHLLEGFPFIQEPPSGDLQERVLIRHHHYDQCFQSVQ FT LLQWNSQVKFNVTVYRNLPTTRDSIMTS" FT gene 2395..2922 FT /gene="G" FT CDS 2395..2922 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LLX9" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2LLX9" FT /protein_id="AAZ49102.1" FT /translation="MFQTFISRHNSNFFSDKLVASSVTPASLAPVLQTPKATSSTLYFD FT SLTINAGNGGFLHCIQMDTSVNAANQVVSVGADIAFDADPKFFACLVRFESSSVPTTLP FT AVYDVYPLDGRHDGGYYTVKDCVTIDVLPRTPGNNVYVGFMVWSNFTATKCRGLVSLNQ FT VIKEIICLQPLK" FT gene 2931..3917 FT /gene="H" FT CDS 2931..3917 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LLX8" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LLX8" FT /protein_id="AAZ49103.1" FT /translation="MFGAIAGGIASALAGGAMSKLFGGGQKAASGGIQGDVLATDNNTV FT GMGDAGIKSAIQGSNVPNPDEAAPNFVSGAMAKAGKGLLEGTLQAGTSAVSDKLLDLVG FT LGGKSAADKGKDTRDYLAAAFPELNAWERAGAGASSAGMVDAGFENQKELTKMQLDNQK FT EIAEMQNETQKEIAGIQSATSRQNTKDQVYAQNEMLAYQQKESTARVASIMENTNLSKQ FT QQVSEIMRQMLTQAQTAGQYFTNDQIKEMTRKVSAEVDLVHQQTQNQRYGSSHIGATAK FT DISNVVTDAASGVVDIFHGIDKAVADTWNNFWKDGKADGIGSNLSRK" XX SQ Sequence 5386 BP; 1292 A; 1139 C; 1256 G; 1699 T; 0 other; gaattttatc gcttccatga cgcagaagtt aacactttcg gatatttctg atgagtcgaa 60 aaattatctt gataaagcag gaattactac tgcttgttta cgaattaaat cgaagtggac 120 tgctggcgga aaatgagaaa attcgaccta tccttgcgca actcgagaag ctcttacttt 180 gcgacctttc gccatcaact aacgattctg tcaaaaactg acgcgttgga tgaggagaag 240 tggctcaata tgcttggcac gttcgtcaag gactggttta gatatgagtc acattttgtt 300 cacggtagag attctcttgt tgacatttta aaagagcgtg gattactatc tgattccgat 360 gctgttcaac cactaatagg taaaaaatca tgagtcaagt tactgaacaa tccgtacgtt 420 tccagaccgc gttggcctcc attaagctga ttcaggcttc tgccgttttg gatttaaccg 480 aagatgattt cgattttctg acgagtaaca aggtttggat tgctactgac cgctctcgtg 540 ctcgtcgctg cgttgaggct tgcgtttatg gtacgctgga ctttgtggga taccctcgct 600 ttcctgctcc tgttgagttt attgctgccg tcattgctta ttatgttcat cccgtcaaca 660 ttcaaacggc ctgtctcatc atggaaggcg ctgagtttac ggaaaacatt attaatggcg 720 tcgagcgtcc ggttaaggcc gctgaactgt tcgcgtttac cttgcgtgta cgcgcaggaa 780 acactgacgt tcttactgac gcagaagaga atgtccgcca aaaattacgc gcagaaggag 840 tgatgtaatg tctaaaggta aaaagcgttc tggtgctcgt cccggtcgtc cacagccgtt 900 gcgaggcact aaaggcaagc gtaaaggtgc tcgtctttgg tatgtaggtg gtcaacaatt 960 ttaatttcag gggcttcggc cccttgcttg aggataaatt atgtctaatg ttcaaactgg 1020 cgccgagcgt atgccgcatg acctttccca tcttggcttt cttgctggtc agattggtcg 1080 tcttattacc atttcaacta ctccggttat cgctggtgac tccttcgaga tggacgccgt 1140 gggcgctctc cgtctttctc cattgcgtcg cggtcttgct attgactcta ctgtagacat 1200 ttttactttt tatgtccctc atcgtcatgt ttatggtgaa cagtggatta aatttatgaa 1260 agatggcgtt aatgccactc cgcttccgac cgttaacact actggttata ttgaccatgc 1320 cgcttttctt ggaacaatta accctgatac caataaaatc cctaagcatt tgtttcaggg 1380 ttatctgaat atctataaca actattttaa agcgccgtgg atgcctgacc gtactgaggc 1440 taaccctaat gagcttaatc aagatgatgc ccgttatggt ttccgttgtt gccatctcaa 1500 aaatatttgg actgctccgc ttcctcctga gactgagctt tctcgccaaa tgacgacttc 1560 taccacttct attgacatta tgggtctgca agctgcttat gctaatttgc atactgacca 1620 agagcgtgat tacttcatgc agcgttaccg tgatgttatt tcttcatttg gaggtaaaac 1680 ctcttatgac gctgacaacc gtcctttact tgtcatgcgc tctaatttct gggcatctgg 1740 ctatgatgtt gatggaactg accaaacgtc gttaggccag ttttctggtc gcgttcaaca 1800 gacctataaa cattctgtgc cgcgtttctt tgttcctgag catggcacta tgtttactct 1860 tgcgcttgtt cgttttccgc ctactgcgac taaagagatt cagtacctta atgctaaagg 1920 tgctttgact tataccgata ttgctggtga ccctgctttg tatggtaact tgccgccgcg 1980 tgaaatttct atgaaggatg ttttccgttc tggtgattca tctaagaagt ttaagattgc 2040 tgagggtcaa tggtatcgtt atgcgccgtc ttatgtttct ccagcatatc acctccttga 2100 aggcttccca tttattcagg aaccgccttc tggtgatttg caagaacgtg tgcttatccg 2160 ccatcatcac tatgaccagt gtttccagtc cgttcagttg ttgcagtgga atagtcaggt 2220 taaatttaat gtgaccgttt atcgcaatct gccgactact cgtgattcaa tcatgacttc 2280 gtgataaaag attaagtgtg aggttataac gccgaagcgg taaaaatttt aatttttgcc 2340 gctgaggggt tgaccaagcg aagcgcggta ggttttctgc ttaggagttt aatcatgttt 2400 cagactttta tttctcgcca taattcaaac tttttttctg ataagctggt tgctagttct 2460 gttactccag cctctctagc acctgtttta cagacaccta aagctacatc gtcaacgtta 2520 tattttgata gtttgacgat taatgctggt aatggtggtt ttcttcattg cattcagatg 2580 gatacatctg tcaacgccgc taatcaggtt gtttctgttg gtgctgatat tgcttttgat 2640 gccgacccta aattttttgc ctgtttggtt cgttttgagt cttcttcggt tccgaccact 2700 ctcccggctg tctatgatgt ttatcctttg gatggtcgcc atgatggtgg ttattatact 2760 gtcaaggatt gtgtgactat tgacgtcctt ccccgtacgc cgggcaataa tgtttatgtt 2820 ggtttcatgg tttggtctaa ctttaccgct actaaatgcc gcggattggt ttcgctgaat 2880 caggttatta aagaaattat ttgtctccag ccacttaagt gaggtgattt atgtttggtg 2940 ctattgctgg cggtattgct tctgctcttg ctggcggcgc catgtctaaa ttgtttggag 3000 gcggtcaaaa agccgcctcc ggtggcattc aaggtgatgt gcttgctacc gataacaata 3060 ctgtaggcat gggtgatgct ggtattaaat ctgccattca aggctctaat gttcccaacc 3120 ctgatgaggc cgcacctaat tttgtttctg gtgctatggc taaagctggt aaaggacttc 3180 ttgaaggtac gttgcaagct ggcacttctg ccgtttctga taagttgctt gatttggttg 3240 gacttggtgg caagtctgcc gctgataaag gaaaggatac tcgtgattat cttgctgctg 3300 catttcctga gcttaatgct tgggagcgtg ctggtgctgg tgcttcctct gctggtatgg 3360 ttgacgccgg atttgagaat caaaaagagc ttactaaaat gcaattggac aatcagaaag 3420 agattgccga gatgcaaaat gagactcaaa aagagattgc tggcattcag tcggcgactt 3480 cacgccagaa tacgaaagac caggtatatg cacaaaatga gatgcttgct tatcaacaga 3540 aggagtctac tgctcgcgtt gcgtctatta tggaaaacac caatctttcc aagcaacagc 3600 aggtttctga gattatgcgc cagatgctta cacaggctca aacggctggc cagtatttta 3660 ccaatgacca aatcaaagaa atgacccgta aggtcagcgc cgaagttgac ttggttcatc 3720 aacagacgca gaatcagcgg tatggttctt ctcatattgg tgctactgca aaggatatct 3780 ctaatgttgt cactgatgct gcttctggtg tggttgatat ttttcatggt attgataaag 3840 ctgttgccga tacttggaac aatttctgga aagacggtaa agctgatggt attggctcta 3900 atttgtctag gaagtaaccg tcaggattga cacctttcta attgtgtgat ttcatgcctc 3960 caaactttgg aggctttttt atggttcgtt cttattaccc ttctgaatgt cacgctgatt 4020 attttgattt tgagcgtatt gaggctctta aacctgctat tgaggcttgt ggcatttcta 4080 ctctttctca atccccaatg cttggcttct ataagcagat ggataaccgc atcaaactct 4140 tggaagagat tctgtctttt cgtatgcggg gcgttgagtt cgataatggt gatatgtatg 4200 ttgacggtca taaggctgct tctgacgttc gtgatgagtt tgtatctgtt actgagaagt 4260 taatggatga attggcacaa tgctataatg tgctccccca acttgatatt aataacacta 4320 tagaccaccg ccccgaaggg gacgaaaaat ggtttttaga gaacgagaag acggttacgc 4380 agttttgccg taagctggct gctgaacgcc ctcttaagga tattcgcgat gagtatgatt 4440 accccaaaaa gaaaggtatt aaggatgagt gttcaagatt gctggaggcc tccactatga 4500 aatcccgtag aggctttact attcagcgtt tgatgaatgc aatgcgccag gctcatgccg 4560 atggttggtt tatcgttttt gacactctca cgttggctga cgaccgatta gaggcgtttt 4620 atgataaccc caatgctttg cgtgactatt ttcgtgatat tggtcgtatg gttcttgctg 4680 ccgagggtcg caaggttaat ggttcacacg ccgactgcta tcagtatttt tgtgtgcctg 4740 agtatggtac agctaatggc cgtcttcatt tccatgcggt gcattttatg cggacacttc 4800 cttcaggtag cgttgaccct aattttggtc gtcgggtacg caatcgccgc cagttaaata 4860 gcttgcaaaa tacgtggcct tatggttaca gtatgcccat cgcagttcgc tacacgcagg 4920 acgctttttc acgttctggt tggttgtggc ctgttgatgc taaaggtgag ccgcttaaag 4980 ctaccagtta tatggctgtt ggtttctatg tggctaaata tgttaacaaa aagtctgata 5040 tggaccttgc tgctaaaggt ctaggagcta aagaatggaa caactcacta aaaaccaagc 5100 tgtcgctact tcccaagaag ctgttcagaa tcagaatgag ccgcaacttc gggatgaaaa 5160 tgctcacaat gacaaatctg tccatggaat gcttaatcca acttaccaag ctgggttacg 5220 acgcgacgcc gttcaaccag atattgaagc agaacgcaaa aagagagatg agattgaggc 5280 tgggaaaagt tactgtagcc gacgttttgg cggcgcaacc tgtgacgaca aatctgctca 5340 aatttatgcg cgcttcgata aaaatgattg gcgtatccaa cctgca 5386 //