ID AY563138; SV 1; linear; genomic RNA; STD; VRL; 2896 BP. XX AC AY563138; XX DT 10-MAY-2004 (Rel. 79, Created) DT 22-APR-2009 (Rel. 100, Last updated, Version 2) XX DE Thielaviopsis basicola mitovirus RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Thielaviopsis basicola mitovirus OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2896 RX DOI; 10.1094/PHYTO-96-0468. RX PUBMED; 18944306. RA Park Y., Chen X., Punja Z.K.; RT "Molecular and Biological Characterization of a Mitovirus in Chalara RT elegans (Thielaviopsis basicola)"; RL Phytopathology 96(5):468-479(2006). XX RN [2] RP 1-2896 RA Park Y., Punja Z.K.; RT ; RL Submitted (02-MAR-2004) to the INSDC. RL Biology, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A RL 1S6, Canada XX DR MD5; 219599e649c5e1dc7e8220d6a1b3b019. XX FH Key Location/Qualifiers FH FT source 1..2896 FT /organism="Thielaviopsis basicola mitovirus" FT /host="Thielaviopsis basicola strain BK18" FT /mol_type="genomic RNA" FT /db_xref="taxon:274584" FT CDS 427..2544 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6Q2W5" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:Q6Q2W5" FT /protein_id="AAT09164.1" FT /translation="MIKYMKSVRLHITRYICRKPLFINDSGVSVDKSGFPTKFIELKKF FT LNNHESSICYHTRLRIILTLLLLPRGLKPTKIEDAKIKPNFSSITLPFSGTRMNPIPTW FT FIKEFVKEYNLKLEKPTYDLSKHYLSPKGGPMGKSTWSSIWSMYALKHELHLSLSYFLG FT EAYKTLFYLPYLKNMALSYGHDVPPKQWPSGKLGIVKDPEGKRRIIAMVDYHSQLVLRS FT IHDGLLNKLRNLPQDRTYNQDPNNAWEENKECFHSLDLSSATDRFPVKLQSRLLTEMYS FT DPSFGENWMNLLLNRDYLLPEEGLSGERLRYAVGQPMGAYSSWAAFTLSHHLVVAWCTY FT KSKKVIRSSQYIILGDDIVIKDNDIARKYIGQMSKLGVAISMQKTHVSKDTYEFAKRWM FT HKGVEISGLPLKGIFYNISHMRRMYTIIFDYLQRIPSKSNLTSLQLFASCLSGIKFGKR FT VYSKALILKLLRNFNISLRYSYGLLTPYELREYILTGFNMGDEVLPSDNRILEWFKGII FT CDGVAGKVSTLSREYTKEVNSLEEHRSSQHILNSINIEITYENLQWSPLIIGMFNHINK FT VSEKCGEWLYGDVPLMDIIQQFTLPSADSLSRKDRDINKKIDELDSLIFKSIKRHFSDQ FT PYPDHFYGTRSNGDKNLYPGLGALDVNVAPEIGFEIKSPINFILKTEIQRLHGNLEMQM FT EKPLREAGIKC" XX SQ Sequence 2896 BP; 1015 A; 455 C; 488 G; 938 T; 0 other; ccgttctccc cttttgggga gaggcggcta tttcttatat agttataact atataccaaa 60 tagaaacaag actcgaaaga gcagattgga cctaattaag gtatcccagt ctagtcactg 120 gttatgactc aaataacaaa ctacatagtt ttgtaccagg gcctgataag ctttgtgtaa 180 catctatgcc gtgaataaca gaaacaaaat atttcaatta ttacaacaaa ctttaacaac 240 aatttattaa agcttaaagc taacatttta aacaaaagtt taaaattcca aggaggggtc 300 tcccccttac ttgttaaatt aactataaac cttataataa atatatttgg aaaagttgat 360 tatagaatta ttaagaattt tctatctgag ataaccaaat tatgaagaaa taatggtttc 420 ttatatatga ttaagtatat gaaatctgtt agattacata taactcgata catatgtaga 480 aaaccgttat ttattaatga ttcaggtgtt tcagtagata aaagtggatt tccaactaag 540 tttatagaac ttaagaaatt tttaaataac catgaaagta gtatttgtta tcatactaga 600 ttacgtataa ttttaacatt attgcttcta cctcgtggat taaaacccac aaagatagaa 660 gatgctaaaa ttaaacctaa ttttagttcg ataactttac cattttcagg gactagaatg 720 aatcctattc ccacttggtt tattaaagaa tttgttaagg agtataacct taaattggag 780 aaaccaacct atgacctaag taaacattac ttaagtccaa agggaggtcc gatgggaaaa 840 tctacatgat catcaatatg atcaatgtat gctcttaaac acgagcttca tttatcacta 900 tcatatttct taggtgaggc atataaaaca ttgttttatc ttccttatct gaaaaatatg 960 gcattgtctt atgggcacga tgtgccccca aaacaatggc ctagtggtaa attaggtatt 1020 gttaaagatc cggaaggtaa aagaagaata attgcaatgg tagattacca ttcacaatta 1080 gttcttcgtt caatccatga tgggcttctt aataaattaa gaaacctacc acaggataga 1140 acatacaatc aagatcctaa caatgcgtga gaagagaata aggaatgttt ccattcctta 1200 gatttatcat cagccactga tagattccca gtaaaactgc aatctagact gcttacagag 1260 atgtattcag atcctagttt tggagagaac tgaatgaatc tgctcttaaa tagagattat 1320 ctattgccag aagaaggcct atcgggtgaa agattgcgtt atgcagtcgg tcaaccgatg 1380 ggtgcttatt ctagttgagc agcattcaca ctttctcacc acttagtagt tgcctgatgt 1440 acttataagt caaagaaggt cataagatct tctcaatata ttatacttgg tgatgatatt 1500 gtcattaaag acaatgacat cgcaagaaag tatattggac aaatgagtaa attaggtgtt 1560 gctatttcaa tgcaaaagac acatgtatcg aaagatacat atgaatttgc aaagagatga 1620 atgcataaag gagtggagat atcaggatta cccttgaaag gtatctttta taatatatct 1680 catatgcgtc gtatgtatac gatcatattt gattatttac aaaggatccc ttccaagtct 1740 aatttgactt ctctgcaact tttcgcatct tgtttaagtg gtattaaatt cggtaaaaga 1800 gtatattcta aagcgttaat acttaagtta ctacgtaact ttaatatttc gctccgttac 1860 tcatatggat tgttaactcc atatgaatta cgtgaatata ttcttacagg atttaatatg 1920 ggagatgaag ttcttccatc agataataga atccttgaat gattcaaggg tattatatgt 1980 gatggagttg ctggaaaagt ctcaaccctt tctcgtgagt acactaagga ggtgaacagt 2040 ttagaagagc atagatcatc tcaacatata ttgaattcaa taaatattga aataacttat 2100 gaaaatctac aatgatcacc acttatcata ggtatgttta atcatattaa taaagtatct 2160 gagaagtgtg gagaatgatt gtatggtgac gttccattaa tggacattat ccaacaattt 2220 actctacctt cagcagattc tttatcaaga aaagaccgag atataaataa aaagattgat 2280 gaattagatt cactaatctt taaatctatc aaacggcatt ttagtgatca accataccca 2340 gatcacttct atggtacaag gtccaatgga gataaaaatt tatatcctgg acttggtgcc 2400 ttagacgtga atgtagctcc cgagattggc tttgaaatta aaagcccgat taattttatc 2460 cttaaaactg aaattcaaag attacatggt aatcttgaaa tgcagatgga aaaacctctt 2520 cgggaagctg gaattaaatg ttagaacatg gagtagttac catgtctacc gctttaatcc 2580 agattatttt aatggaagag tatggaatag ttaccatacc tcccgcttaa aatacaaata 2640 gttcaaagtg agactatata taataatatt gctataaaca actgttaatt aaagtgctgg 2700 gtttatccat acttttagct ttattttaac agatgaagtt gaagtgctgg gtttacccat 2760 acctttagct taacttaaca tccaaattta tttgttatcg ttataactta gttaccaagt 2820 tgtgattaac atgttcacaa cttgtcttaa ggttatagcg ccgtaattct ctgaacttaa 2880 aagttcagag gaacgg 2896 //