ID AY211885; SV 1; linear; genomic DNA; STD; VRL; 2804 BP. XX AC AY211885; XX DT 02-JUL-2004 (Rel. 80, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 1) XX DE African cassava mosaic virus isolate CM/DO3 AV2, coat protein, AC3, AC2, DE AC1, and AV4 genes, complete cds. XX KW . XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2804 RA Fondong V.N., Pita J.S., Rey C.M., Fauquet C.M.; RT "Molecular characterization of viruses associated with the cassava mosaic RT disease epidemic in Cameroon"; RL Unpublished. XX RN [2] RP 1-2804 RA Fondong V.N., Pita J.S., Rey C.M., Fauquet C.M.; RT ; RL Submitted (06-JAN-2003) to the INSDC. RL Biotechnology, Delaware State University, 1200 North DuPont Highway, Dover, RL DE 19901, USA XX DR MD5; 5ecdd8dc6675c980bd6835b40d661671. DR EuropePMC; PMC1079959; 15784145. XX FH Key Location/Qualifiers FH FT source 1..2804 FT /organism="African cassava mosaic virus" FT /host="cassava" FT /isolate="CM/DO3" FT /mol_type="genomic DNA" FT /country="Cameroon:Douala" FT /note="acronym: ACMV" FT /db_xref="taxon:10817" FT CDS 196..483 FT /codon_start=1 FT /product="AV2" FT /db_xref="GOA:Q6EMH6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6EMH6" FT /protein_id="AAO34426.1" FT /translation="MLAIKYLQALEDTYEPSTLGHDLVRDLVSVIRARNYVEATRRYHH FT FHSRLQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHVQKAHDVQDV" FT CDS 302..1078 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q6EMH5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6EMH5" FT /protein_id="AAO34425.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSVYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENGVAFVHGMYSCLQTLYMLREYVYTFYDSIGN" FT CDS complement(1099..1503) FT /codon_start=1 FT /product="AC3" FT /db_xref="GOA:Q6EMH4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6EMH4" FT /protein_id="AAO34429.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRFWTPLKPQTGRFLRVFRYQVLKYLDIIGVISINX FT VIRAADHVLFNVIEKTIECQLTHEIKFLTS" FT CDS complement(1244..1651) FT /codon_start=1 FT /product="AC2" FT /db_xref="GOA:Q6EMH3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6EMH3" FT /protein_id="AAO34428.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNNQAPTTTIPAEPGHHNSPGSIQSQ FT PAEGAGDSQMFSQLQVLDALKASDWSFLKGL" FT CDS complement(1560..2636) FT /codon_start=1 FT /product="AC1" FT /db_xref="GOA:Q6EMH2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6EMH2" FT /protein_id="AAO34427.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCLHPSCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLERIFQEPPAPYISPFPCSSFDQVPDELEEWVADNVRASAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSXRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" FT CDS complement(2180..2602) FT /codon_start=1 FT /product="AV4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6EMH1" FT /protein_id="AAO34430.1" FT /translation="MSFSHTQSVLSPKNTCCHSFKHSLSHLTLSSLKSVGSCIRMGNLT FT CMPSSNSRAKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSHTWIRTATPSNGDNF FT RSMDDLLEAVNSPQMMLTPKRLTAAVSQXLLMSLGN" XX SQ Sequence 2804 BP; 752 A; 561 C; 686 G; 800 T; 5 other; taatattacc ggttggcccc gccccccttt aaacgtggtc cccgcgcact acgtatgtcg 60 gccaatcatg ctgtagcgtt aaaggttatt tattagtggt ggaccactat atacttacag 120 gcgaagttgt tgctagtgcg caatggggat ccactggtga atgagtttcc tgactcggtg 180 catgggctta ggtgtatgct tgcaattaaa tatttgcagg ccttagagga tacatacgag 240 cccagtactc tgggccacga tctggttaga gatttagtct cagttatcag ggctcgtaat 300 tatgtcgaag cgaccaggag atatcatcat ttccactcca ggctccaagg ttcgtcgaag 360 gctgaacttc gacagcccat acaggaaccg tgctactgcc cccactgtcc acgtcacaaa 420 tcgaaaacgg gcctggatga acaggcccat gtacagaaag cccatgatgt acaggatgta 480 tagaagccca gacataccca ggggctgtga aggcccatgt aaggtccagt cgtttgagca 540 gagggatgat gttaagcacc ttggtatctg taaggtgatt agtgatgtga cacgtgggcc 600 tgggctgaca cacagggtcg gaaagaggtt ttgtatcaag tccgtttaca ttcttggtaa 660 gatctggatg gatgaaaata ttaagaagca gaatcacact aataatgtga tgttttacct 720 gcttagggat agaaggcctt atggcaatac gccccaagac tttgggcaga tatttaacat 780 gtttgataat gagcccagta ctgcaacaat taagaacgat ttgagggata ggtttcaggt 840 gttgaggaaa tttcatgcca ctgttattgg tggtccatct ggcatgaagg agcaggcttt 900 ggtgaaaagg ttttacaggt tgaatcatca cgtgacatat aatcatcagg aggcagggaa 960 gtatgagaat cacacagaaa atggcgttgc ttttgtacat ggcatgtact catgccttca 1020 aaccctgtat atgctacgtg aatacgtata tactttctat gacagtattg gcaattaata 1080 aatattggat ttttattttc atgaagtcaa gaattttatt tcatgagtca actgacactc 1140 aatagttttt tcaattacat tgaacaaaac atgatcagca gctctaatta crtsgttaat 1200 tgagataaca cctataatat ccaagtattt aagtacttgg tatctaaaga cccttaagaa 1260 acgaccagtc tgaggcttta agggcgtcca gaacctgaag ttgagaaaac atttgtgaat 1320 ccccagctcc ttccgcaggt tgtgattgaa tcgaacctgg actgttatga tgtcctggtt 1380 cagcaggaat ggtcgttgtt ggtgcctggt tattgtgaaa tacaggggat tgtttatttc 1440 ccaggtatac acgccattca ttgcttgagg agcagtgatg agttcccctg tgcgtaaatc 1500 catgattgga gcagttgata tggaggtaat atgaacagcc acagacaaga tccactctcc 1560 tacgccggat ggctcgcttc ttgaattgtc tgtgactgac tttgattgga acctgagtag 1620 agtggttctg tgagggtgat gaagattgca ttctttaatg cccaggcctt tagcgcttct 1680 tgcttttcct cgtctaggaa ctctttatag gacgaggttg gtcctggatt gcagaggaag 1740 atagtgggaa tgccaccttt aatttgaacg ggtttcccgt attttgtgtt ggactgccag 1800 tcccgctrgg accccatgaa ttccttaaag tgctttaggt agtgaggatc gacgtcatca 1860 atgacgttgt accaagcagc attattraag acctttggac taaggtccag gtgtccacac 1920 aggtaattgt gtgggcctaa agatctggcc catatcgtct tccctgttct gctatcacct 1980 tctatgacaa tactattggg tctccatggc cgcgcagcgg aagcccgaac attatcagcg 2040 acccattctt caagttcatc aggaacttgg tcaaaggaag aacatgggaa gggagaaata 2100 taaggagctg gtggctcctg gaaaatcctt tctaaattac tatttagatt atgaaactga 2160 agtacaaagt cctttgggac taattcccta atgacattaa gagcytctga cttactgccg 2220 ctgttaagcg ctttggcgta agcatcattt gcggactgtt gaccgcctct agcagatcgt 2280 ccatcgatct gaaattgtcc ccattcgacg gtgtcgccgt ccttatccag gtatgacttg 2340 acatctgagc ttgatttggc accttgaatg ttggggtgga aactggtgct acagcttggg 2400 tgtagacaat cgaagagacg attgttcgta atcgtgattt tgccctcgaa ttggatgagg 2460 gcatgcaagt gaggttcccc attctgatgc agctccctac agattttaat gaacttaggg 2520 ttagatggga gagagagtgt ttgaatgaat gacagcaggt gttctttggg gatagaacac 2580 tttgggtatg tgagaaagac attcttggct tgaactctaa aacgaggagt cctcattttg 2640 accaagtcaa ttggagacac tcaactagag acactcttga gcatctcctc ctgttaattg 2700 gagacattat atagttgtct ctaaatggca ttcttgtaat aagtggaact ttaatttgaa 2760 tgaaaaggct caaaaggctc agaacaccca aggggccaac cgta 2804 //