ID   AY049223; SV 1; linear; genomic DNA; STD; VRL; 1335 BP.
XX
AC   AY049223;
XX
DT   06-MAR-2002 (Rel. 71, Created)
DT   22-DEC-2015 (Rel. 127, Last updated, Version 4)
XX
DE   Tomato chlorotic mottle virus isolate PE-Pq1 replication-associated protein
DE   (AC1) gene, partial cds; putative AC4 protein (AC4) gene, complete cds; and
DE   capsid protein (AV1) gene, partial cds.
XX
KW   .
XX
OS   Tomato chlorotic mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1335
RX   DOI; 10.1007/s00705-002-0917-0.
RX   PUBMED; 12556993.
RA   Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT   "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT   Brazil";
RL   Arch. Virol. 148(2):281-295(2003).
XX
RN   [2]
RP   1-1335
RA   Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA   Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT   ;
RL   Submitted (31-JUL-2001) to the INSDC.
RL   Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL   Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
DR   MD5; e9478b0a40dabf51b9a075b3d2008c50.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1335
FT                   /organism="Tomato chlorotic mottle virus"
FT                   /isolate="PE-Pq1"
FT                   /mol_type="genomic DNA"
FT                   /note="acronym: TCMV"
FT                   /db_xref="taxon:172391"
FT   gene            complement(<1..675)
FT                   /gene="AC1"
FT   CDS             complement(<1..675)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:Q8QPQ8"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPQ8"
FT                   /protein_id="AAL82878.1"
FT                   /translation="MPPAKTFSFKCEELFSHISSVLLTKEEALSQLLAIQTPVNKLFLR
FT                   VARELHEDGQPHLHILIQFEGKFVCTNSRLFDLTSPTRSTHFHPNIQAAKSSSDVKSYV
FT                   EKDGDFVDHGVFQVDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH
FT                   NIRSNLERIFAKAPEPWVPPFPLSSFTNVPVEMQAWADDYFGRHAAARPERPVSIIIEG
FT                   DSR"
FT   gene            complement(225..543)
FT                   /gene="AC4"
FT   CDS             complement(225..524)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="putative AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QHP9"
FT                   /protein_id="AAL82879.1"
FT                   /translation="MKMGNLICTSSFSSKESSSAQTADYSTSHLQPGQHISIRTYRQLR
FT                   ARQMSNHTWRKTETSLIMEFSRSMVDQLEEVSNLPTTRTPRSSMQDQSWKHSIY"
FT   gene            991..>1335
FT                   /gene="AV1"
FT   CDS             991..>1335
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q8QPQ7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QPQ7"
FT                   /protein_id="AAL82877.1"
FT                   /translation="MPKRDAPWRHMAGTSKISRGANYSPRAGVGPRSNKAAEWVNRPMY
FT                   RKPRIYRMYRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRF
FT                   CVKSVYILGKV"
XX
SQ   Sequence 1335 BP; 353 A; 286 C; 328 G; 368 T; 0 other;
     tcttgaatca ccctcgatta ttatactgac aggtctctcc ggccgcgcag cggcatgtct        60
     tccgaaataa tcatctgccc aagcttgcat ctcgacaggc acgttagtga acgacgagag       120
     tggaaacgga ggaacccacg gttctggagc cttcgcaaaa atacgctcta aattagaacg       180
     aatattatga tgttgaagca cgaaatcctt tggctgttct tctcttaata tattgagtgc       240
     ttccatgact gatcctgcat tgaggacctt ggcgtacgtg tcgttggcag attgctgacc       300
     tcctctagct gatctaccat cgacctggaa aactccatga tcaacgaagt ctccgtcttt       360
     ctccacgtat gatttgacat ctgacgagct cttagctgcc tgtatgttcg gatggaaatg       420
     tgttgacctg gttggagatg tgaggtcgaa taatctgctg tttgtgcaga cgaactttcc       480
     ttcgaactga atgaggatgt gcagatgagg ttgcccatct tcatgtaatt ccctggcaac       540
     tcgcaagaac agtttattaa ctggtgtttg aatggctaat agttgagaaa gtgcttcttc       600
     ttttgtaagg agcactgagg atatgtgaga aaataattct tcgcacttaa acgaaaacgt       660
     tttggccggt ggcattctcg taaataaagg ggtgtcacca attggggtct cgctcaactg       720
     tgctagtcaa ttggtgactg gtgacaatat atagtagaag cctctataga ctttcaatca       780
     caatcgaaca cttgcggcca tccgttataa tattacggat ggccgcgaaa aaatttagac       840
     ctgggccgct ttatttgggc cgctcaatga aagtaatgtg tggcccaacc atgttacgtc       900
     tgacgagcta agataattga aacgacttag cgcccaagtt taacaacggc tataaattga       960
     acgtgcattt gtcgataact ttaattcaaa atgcctaagc gcgatgcccc atggcgccac      1020
     atggcaggta cgtctaagat tagccggggc gctaattatt ctcctcgtgc aggagttggg      1080
     ccacgatcca acaaggccgc tgaatgggta aataggccta tgtacaggaa gcccaggata      1140
     tatcggatgt acaggacccc cgatgttcca agaggctgtg aaggcccatg taaagtccag      1200
     tcgtatgagc agcgtcacga tatatcccat gttgggaagg tgatgtgcgt ctcggacgtg      1260
     acaagaggta atggtattac ccaccgtgta ggaaaacgtt tttgtgttaa gtctgtgtat      1320
     attttaggta aggta                                                       1335
//