ID AM050730; SV 1; circular; genomic DNA; STD; VRL; 2757 BP. XX AC AM050730; XX DT 05-DEC-2005 (Rel. 86, Created) DT 28-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE Sida leaf curl virus complete genome, isolate Hn57 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete genome; replication protein. XX OS Sida leaf curl virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2757 RA Zhou X.; RT ; RL Submitted (21-JUL-2005) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RX DOI; 10.1007/s11262-006-0066-8. RX PUBMED; 16990998. RA Guo X., Zhou X.; RT "Molecular characterization of a new begomovirus infecting Sida cordifolia RT and its associated satellite DNA molecules"; RL Virus Genes 33(3):279-285(2006). XX DR MD5; dc0b24b28088ac481881efa549cea40c. XX FH Key Location/Qualifiers FH FT source 1..2757 FT /organism="Sida leaf curl virus" FT /isolate="Hn57" FT /mol_type="genomic DNA" FT /country="China:Hainan" FT /db_xref="taxon:337823" FT CDS 134..481 FT /transl_table=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2WCL3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2WCL3" FT /protein_id="CAJ19250.1" FT /translation="MWDPLENEFPETVHGFRSMLAVKYMQEIAKSYEPSTLGFEYVRDL FT ISVLRCKDYVQASCKYGVFLSNFFRASKAELRQSSPISCCCPYCPRHKEKKMDQQAHEQ FT KAQVLQNVSNP" FT CDS 294..1064 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q2WCL8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2WCL8" FT /protein_id="CAJ19251.1" FT /translation="MSKRPASMAYSSPISSARRRLNFDSPRPSVAAALTAPGIRRRRWT FT NRPMNRKPRFYRMYRTPDVPKGCEGPCKVQSFDAKDDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPTGTPLDFQQVFNVYDNEP FT ATATVKNDKRDRFQVLRRFHATVTGGQYAAKESAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKCRSYFYDTVTN" FT CDS complement(1067..1471) FT /transl_table=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2WCL7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2WCL7" FT /protein_id="CAJ19252.1" FT /translation="MDSRTGEYITAAQATSGVYTWDMANPLYFKILDHLDRPFLRNHDI FT ITVQVRFNHNLRKALGIHKCFITFRIWTRLHPQTWRFLRVLRNQVLGYLDRLGVISINN FT VIRAFDHVLYNVIQGTIQVQQTESIKFNLY" FT CDS complement(1185..1619) FT /transl_table=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2WCL6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2WCL6" FT /protein_id="CAJ19253.1" FT /translation="MRRSSPSQSHCTQVPIKIEHQKVRKKYNRRKRVDLECGCTYFRSL FT NCHNHGFTHRGIHHCSSSDEWRIYLGYGKSPVFQDPRPPGQAVPPQPRHHNRPSEVQPQ FT PEESLGDSQMFHNLPDLDSFTSSDMAFLEGLTQSSSWVLR" FT CDS complement(1513..2607) FT /transl_table=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:Q2WCL5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2WCL5" FT /protein_id="CAJ19254.1" FT /translation="MAPSKRFNIYCKNYFLTYPKCSLTKEETLSQIQNLNTPTNKKYIK FT VCRELHENGEPHIHVLIQFEGKYKCQNQRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQIDGRSARGGQQTANDAYAAALNTGSKPEALRVLRELAPKDYVLQFH FT NLNANLDRIFTPPMEVYVSPFSVSSFDRVPEELEEWACENVVAAAARPLRPLSLVVEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKTWALKNASFVTLTEPL FT YSGAHQNRASEGEEEVQSQEEGGP" FT CDS complement(2148..2450) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2WCL4" FT /protein_id="CAJ19255.1" FT /translation="MGNLIFTCSSSSRGNTSARISDSSTWSPQTGQHISIRTFRELNQA FT QMSSPTSTRTATPSNGESFRSTEDLPEGDNRQPTTLTPQHLTQAVSRRLLEYLGN" XX SQ Sequence 2757 BP; 698 A; 610 C; 649 G; 800 T; 0 other; accggatagc cgcgcgattt tttaaagtgg tcccccccac taaatgttgt cgaccaacca 60 gaaggcgcgc tcaaagctta attgtttttt ccctccctat ataatacttc cctcgtaagt 120 tttgggttca aatatgtggg accctttaga gaacgaattc cctgaaaccg ttcacggttt 180 ccgttctatg cttgcggtga agtatatgca ggagattgcg aagagctacg aacctagcac 240 attgggtttt gaatacgtcc gtgatcttat ctccgttctg aggtgtaagg attatgtcca 300 agcgtcctgc aagtatggcg tattcctctc caatttcttc cgcgcgtcga aggctgaact 360 tcgacagtcc tcgcccatca gttgctgctg cccttactgc cccaggcata aggagaagaa 420 gatggaccaa caggcccatg aacagaaagc ccaggttcta cagaatgtat cgaacccctg 480 atgttcctaa gggctgtgag ggcccatgta aggtgcaatc gttcgatgcc aaagacgata 540 ttgggcacat gggtaaggtt atttgtttgt ctgatgttac aagaggtatt gggctgaccc 600 accgagtggg taagcgtttc tgtgtgaaat cattgtattt cgtagggaaa atatggatgg 660 acgagaatat caaggtgaaa aaccacacga acaccgttat gttttggatt gttagggatc 720 ggcgacctac gggaactcca ttggatttcc agcaggtgtt taatgtctac gataacgagc 780 ccgccactgc tacagtcaag aacgacaaac gtgatcgttt ccaggtttta aggaggttcc 840 atgcaacggt gaccggaggg caatatgcag ctaaggagtc tgctattatt aggaagttct 900 atcgtgtgaa caattatgtt gtttacaacc accaggaggc cggaaaatac gagaaccata 960 ctgagaatgc tttgctcttg tacatggcat gtacgcatgc ctctaatcct gtgtatgcta 1020 ctttgaaatg taggagttat ttctacgata ctgtaacgaa ttaagattaa taaaggttga 1080 attttattga ctcagtttgt tgcacctgaa ttgtgccttg aattacattg tataatacat 1140 gatcaaaagc cctaattaca ttattaatac taataactcc taatctatct aagtacccaa 1200 gaacttgatt gcgtaagacc ctcaagaaac gccatgtctg aggatgtaaa cgagtccaga 1260 tccggaaggt tatgaaacat ttgtgaatcc ccaaggcttt cctcaggttg tggttgaacc 1320 tcacttggac ggttatgatg tcgtggttgc ggaggaacgg cctgtccagg tggtctagga 1380 tcttgaaata caggggattt gccatatccc aggtatatac gccactcgtc gcttgagctg 1440 cagtgatgta ttcccctgtg cgtgaatcca tggttgtgac agttgagact gcggaagtat 1500 gtgcacccgc attcaaggtc caccctcttc ctgcgattgt acttcttcct caccttctga 1560 tgctcgattt tgatgggcac ctgagtacaa tggctctgtg agggtgacga acgacgcatt 1620 ttttaaagcc cacgtcttta aagcggaatt cttttcctcg tccaggtact ctttatagct 1680 ggaattgggc cctggattgc aaaggaagat tgttgggatc ccgcctttaa tttgaactgg 1740 cttgccgtac ttggtattgc tttgccagtc cctctgggcc cccataaact ctttaaagtg 1800 tttgagaaaa tggggatcaa cgtcatcgat gacgttgtac catgcgtcgt tgctgtacac 1860 ctttgggctt aggtctagat gcccacacaa gtaattatgt ggacctaatg acctggccca 1920 catcgtcttc cctgttctac tgtcaccttc taccactaaa cttaagggtc tcagaggccg 1980 cgcagcggcc gccactacat tctcgcacgc ccactcttcg agttcttccg gaactcgatc 2040 aaaagaagag acagaaaaag gagaaacata aacctccatt ggaggtgtaa aaatcctatc 2100 taagttagca tttaaattat gaaattgtaa aacataatct ttaggggcta gttccctaag 2160 tactctaaga gcctccggct tactgcctgt gttaagtgct gcggcgtaag cgtcgttggc 2220 tgtctgttgt ccccctctgg cagatcttcc gtcgatctga aactctcccc attcgatggt 2280 gtcgccgtcc ttgtcgatgt aggacttgac atctgagctt gatttagctc cctgaatgtt 2340 cggatggaaa tgtgctgacc ggtttgggga gaccaggtcg aagaatcgct gattctggca 2400 cttgtatttc ccctcgaact ggatgagcac gtgaatatga ggttccccat tctcgtggag 2460 ttctctgcag accttaatgt attttttgtt ggttggggtg tttaggtttt ggatttggga 2520 aagtgtttcc tctttagtaa gagagcattt gggataagta aggaaataat ttttgcaata 2580 aatgttaaag cgtttagagg gagccataat ggtcaatgat caccgattga ctcgctcttg 2640 caactctctc tggtatttcg gtgatcaata tatagtgatc accaaatggc attaatcgta 2700 aatacccata gaaattcaaa tccctcgcgc tccaaaagcg gccatccgta taatatt 2757 //