ID   AJ968558; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
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AC   AJ968558;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda M virus partial reverse transcriptase-RNaseH, clone
DE   51-6
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak UM virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; ea26777255d9292af9455ca199052205.
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak UM virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="51-6"
FT                   /db_xref="taxon:1016857"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0G0"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0G0"
FT                   /protein_id="CAI91544.1"
FT                   /translation="LKNAPAIFQRKMDNCFRGTEAFIAVYIDDILVFSRNPEEHARHLE
FT                   EMLKICKANGLILSPTKYKIGVKVVDFLGSTIGENQLHLQPHIVQKIIEFDEEKLKAKK
FT                   GLKSWLAILNYARGHIKNMGRILGPLYPKTSEKGERRLNSEDWKIIRRMKQEVKNLPKL
FT                   SIPPENAYIVIETDGSMN"
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SQ   Sequence 543 BP; 213 A; 96 C; 118 G; 116 T; 0 other;
     ctcaaaaatg ccccagcaat attccagcgc aagatggata attgtttcag agggactgag        60
     gcattcatag cagtatacat agatgacata ttggtattct caagaaaccc ggaagaacat       120
     gcaaggcacc ttgaagaaat gcttaagatt tgcaaggcaa atgggctcat tctcagccca       180
     acaaaataca aaattggggt gaaagtagta gacttccttg gaagcactat tggagaaaac       240
     cagctacatc tgcaaccaca catagtccag aaaatcatag aatttgatga agaaaaactg       300
     aaagcaaaga agggactgaa atcatggctg gcaatattaa actacgccag gggacacatc       360
     aagaatatgg gaaggatttt gggaccatta tatcccaaaa catcagagaa aggagaaagg       420
     aggctaaatt ctgaagattg gaagataatc agaaggatga agcaagaggt aaagaatctg       480
     ccaaaactct caatacctcc tgaaaatgct tatatagtca ttgaaacaga tggttcaatg       540
     aat                                                                     543
//