ID   AJ968531; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
XX
AC   AJ968531;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 4)
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DE   Banana streak Uganda M virus partial reverse transcriptase-RNaseH, clone
DE   14-3
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak UM virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; 4190025cf4c7c9fd8fa6bda73abb9c61.
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak UM virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="14-3"
FT                   /db_xref="taxon:1016857"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0I7"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0I7"
FT                   /protein_id="CAI91517.1"
FT                   /translation="LKNAPAVFQRKMDNCFRGTEAFIAVYIDDILVFSKDPEEHAKHLE
FT                   EMLKICKANGLILSPTKYKIGVKVVDFLGSTIGENQLHLQPHIVQKIIDFDEEKLKAKK
FT                   GLKSWLAILNYARGHIKNMGRILGPLYPKTSEKGERRLNSEDWKIIRRMKQEVRNLPKL
FT                   SIPPENAYIVIETDGSMN"
XX
SQ   Sequence 543 BP; 212 A; 101 C; 120 G; 110 T; 0 other;
     ctcaaaaatg ccccagcagt attccagcgc aagatggata attgtttcag agggactgag        60
     gcattcatag cagtatacat agatgacata ttggtattct caaaggaccc agaggaacat       120
     gcaaaacacc tggaagaaat gctcaagatt tgcaaggcaa atgggctcat tctcagccca       180
     acaaaataca agatcggagt aaaggtagtg gacttccttg gaagtacaat tggagaaaac       240
     caactacatc tgcaaccaca catagtccag aaaatcatag actttgatga agaaaagctg       300
     aaagcaaaga aaggactgaa atcatggctg gcaatattaa attatgccag aggacacatc       360
     aagaatatgg gaaggatttt ggggccgctg tatcccaaaa catcagagaa aggagaaaga       420
     aggctaaatt ctgaggattg gaagataatc agaagaatga agcaagaggt aagaaatctg       480
     ccaaaacttt caataccccc tgaaaatgcc tacatagtca ttgaaacaga tggctcaatg       540
     aac                                                                     543
//