ID   AJ968516; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
XX
AC   AJ968516;
XX
DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
XX
DE   Banana streak Uganda L virus partial reverse transcriptase-RNaseH, clone
DE   8-4
XX
KW   reverse transcriptase-RNaseH.
XX
OS   Banana streak UL virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
XX
RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
XX
DR   MD5; 84c07caffac785882c62c86090ff8d7f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak UL virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="8-4"
FT                   /db_xref="taxon:1016856"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0K2"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0K2"
FT                   /protein_id="CAI91502.1"
FT                   /translation="LKNAPAIFQRKMDNCFRGTEKFIAVYIDDILVFSETEEEHVIHLT
FT                   KMLEICKRNGLILSPAKMKIGVRVVDFLGSTIGQNQLDLQPHIVQKIAEFDDNKLKTKE
FT                   GLKSWLAILNYARGHIKNMGKILGPLYPKTSEKGERSLNSEDWKIIRKMKKEVKNLPKL
FT                   SIPPQDAYIIIETDGSMN"
XX
SQ   Sequence 543 BP; 212 A; 89 C; 108 G; 134 T; 0 other;
     ctcaaaaatg cgccagcaat ctttcaaaga aagatggata attgtttcag aggtactgag        60
     aagttcatag cagtatatat tgatgatatt ctggttttct cagaaactga agaagagcac       120
     gtgattcatc tcacaaagat gctggagatc tgcaaaagaa atggattaat tttaagtcct       180
     gccaaaatga agattggagt cagagtggtt gatttccttg gaagtacaat tggacaaaat       240
     cagctagact tgcagcctca tattgtacag aaaatagcag aatttgatga taataagctc       300
     aaaaccaagg aaggactgaa atcctggcta gcaatcttaa attatgccag aggacatatt       360
     aaaaacatgg gaaaaatact cggaccactc tatccaaaaa cctcagaaaa gggagaaaga       420
     tcactaaatt ctgaagattg gaagatcatc agaaagatga aaaaggaggt aaaaaacctg       480
     ccaaaacttt ctataccccc tcaagatgcg tatattatca ttgaaacaga tggatcaatg       540
     aat                                                                     543
//