ID   AJ968478; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
XX
AC   AJ968478;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda I virus partial reverse transcriptase-RNaseH, clone
DE   2-1
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak UI virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
XX
DR   MD5; 89264cf9ff430b7c6eb21174d4572ab8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak UI virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="2-1"
FT                   /db_xref="taxon:1016855"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0P0"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0P0"
FT                   /protein_id="CAI91464.1"
FT                   /translation="LKNAPAIFQRKMDLCFQGTESFIAVYIDDILIFSQNEEEHAEHLY
FT                   RMMEICKKNGLILSPTKMKIGVKVVDFLGSTVGENHLDLQPHIVQKIVDFDEEKLKTKK
FT                   GLKSWLAILNYARGHIKNMGKILGPLYPKTSEKGEKRLNSEDWKIIRKMKEEVRRLPKM
FT                   AIPPEDAYIVIETDGSMN"
XX
SQ   Sequence 543 BP; 208 A; 87 C; 121 G; 127 T; 0 other;
     ttaaaaaatg cacctgcaat attccagaga aaaatggacc tatgctttca aggtacggaa        60
     agtttcattg cagtatatat tgatgatatc ttgattttct cacagaatga agaggaacat       120
     gcggagcatt tatatagaat gatggaaatc tgcaagaaga acggattaat tctcagccca       180
     acaaaaatga agatcggggt caaggtggtt gattttctag gaagcactgt tggtgaaaat       240
     cacctggatt tacaaccaca tattgtgcaa aagatagtgg attttgatga agaaaaactg       300
     aagacaaaga aaggtctcaa atcctggctg gcaattctca attatgccag gggacacatc       360
     aaaaacatgg gaaaaatcct aggtccacta taccccaaaa cttcggaaaa aggggagaag       420
     agattgaatt ctgaagactg gaaaataatc agaaaaatga aggaagaagt cagaaggttg       480
     cccaagatgg caataccccc agaggatgca tacatagtca tagaaacaga tggttctatg       540
     aat                                                                     543
//