ID   AJ968470; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
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AC   AJ968470;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda G virus partial reverse transcriptase-RNaseH, clone
DE   53-1
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak Uganda G virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; 1e4e589042861c19399e092c8767dba0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak Uganda G virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="53-1"
FT                   /db_xref="taxon:328682"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0P8"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0P8"
FT                   /protein_id="CAI91456.1"
FT                   /translation="LKNAPAIFQRKMDDCFRGMEQFIAVYIDDILVFSENMRDHAKHLK
FT                   RMIEICQENGLVLSPTKMKIAVQEIEFLGAVLGNSRIKLQPHIIKRIMEYNEEDLTTKR
FT                   SMRSWLGILNYARSYIPNLGKLLGPLYSKTSPTREKRMNEQDWKLIREIKGIVNKLPDL
FT                   EVPPQECFIILEVDGCME"
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SQ   Sequence 543 BP; 204 A; 103 C; 122 G; 114 T; 0 other;
     ctgaagaatg cccctgcaat atttcaaaga aaaatggacg actgctttcg aggtatggag        60
     caattcatag cagtctacat agatgacata ttagtattct ctgaaaatat gagggatcac       120
     gcgaaacacc tgaaaagaat gatcgagata tgccaggaaa acggactggt cctgagccca       180
     accaagatga aaattgcggt ccaggaaatt gagttccttg gagcagttct cggtaattcg       240
     aggatcaaac ttcaacccca cattatcaaa agaatcatgg aatacaatga agaagacctg       300
     acaacaaaaa ggagcatgag atcatggtta ggaatactaa actatgcgag gagttatata       360
     cctaacctcg gcaaactcct agggccgtta tactctaaga caagcccaac aagagaaaag       420
     aggatgaatg agcaagactg gaagcttatc agagaaataa aaggaatagt aaataagctg       480
     ccagacctag aagtcccacc ccaagaatgt tttataatcc tagaggtgga cggatgtatg       540
     gaa                                                                     543
//