ID   AJ968468; SV 1; linear; genomic DNA; STD; VRL; 543 BP.
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AC   AJ968468;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda E virus partial reverse transcriptase-RNaseH, clone
DE   52-5
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak Uganda E virus
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Caulimoviridae; Badnavirus; Banana streak virus.
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RN   [1]
RP   1-543
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; a5a4683e24b08cdf9a72f0d1846bb738.
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Banana streak Uganda E virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="52-5"
FT                   /db_xref="taxon:328680"
FT   CDS             <1..>543
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0Q0"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0Q0"
FT                   /protein_id="CAI94744.1"
FT                   /translation="LKNAPAVFQRKMDNCFKGTEQFIVVYIDDILVFSENEKEHEQHLT
FT                   KMLKICQENGLVLSPTKMKIAVKEIEFLGAVLGNSKIKLQPHIIKKITDYREEDLTTKK
FT                   GLRSWLGILNYARSYIPNLGRLLGPLYSKTSPTGEKRMNKQDWELIKKIKGLVQNLPDL
FT                   EVPPEDCFIILETDGCME"
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SQ   Sequence 543 BP; 202 A; 111 C; 108 G; 122 T; 0 other;
     ctcaaaaatg cccctgctgt attccaaagg aaaatggata attgcttcaa aggtacggaa        60
     caattcattg tagtctacat tgatgatatc cttgttttct cagaaaacga aaaggagcat       120
     gagcaacacc tcaccaagat gttaaaaata tgccaagaga atggccttgt tttaagcccg       180
     acaaagatga aaattgcagt aaaggaaatt gaatttcttg gagcagtcct ggggaattcc       240
     aaaatcaaac tgcaacccca tatcattaaa aaaattactg attatcggga agaagacctc       300
     actaccaaga aaggcctcag atcatggcta gggatcctaa actatgcaag gagctacata       360
     cccaaccttg gcagactcct aggcccgtta tattcaaaaa caagcccaac aggcgagaaa       420
     aggatgaaca agcaagattg ggaactgatc aagaaaatca agggcttagt acaaaatctt       480
     cctgacctag aagtacctcc tgaagattgt ttcataatac tggaaacaga cggatgcatg       540
     gaa                                                                     543
//