ID   AJ968462; SV 1; linear; genomic DNA; STD; VRL; 537 BP.
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AC   AJ968462;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda A virus partial reverse transcriptase-RNaseH, clone
DE   48-2
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak UA virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-537
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; e725bf3b882c7849d006a0f1d15dcead.
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FH   Key             Location/Qualifiers
FH
FT   source          1..537
FT                   /organism="Banana streak UA virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="48-2"
FT                   /db_xref="taxon:1016854"
FT   CDS             <1..>537
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0Q6"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0Q6"
FT                   /protein_id="CAI91451.1"
FT                   /translation="LKNAPAIFQRKMDHCFHEDFIAVYIDDILVFSETVQQHKQHLKVF
FT                   FDICEKNGLVLSPTKMKIGTRQVDFLGATIGNSRIKLQPHIIKKIADIKDEELKEVRGL
FT                   RKWLGILNYARNYIPNLGKTLGPLYSKTSPNGERRMNSQDWAIVRRIKEQVLNLPDMEL
FT                   PPKEAVMIIETDGCME"
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SQ   Sequence 537 BP; 193 A; 92 C; 120 G; 132 T; 0 other;
     ttgaagaacg ccccagcaat ctttcagagg aaaatggatc attgtttcca tgaagacttc        60
     atagcagtat acattgatga tatcttggtc ttctcagaaa ctgtccagca gcacaagcaa       120
     catctgaagg tattctttga tatttgtgag aaaaatgggt tggtattaag cccaacaaag       180
     atgaagatag ggacaaggca agtagatttt cttggagcca caattggaaa ttccagaatc       240
     aagcttcaac ctcatataat caagaagata gctgatatta aggatgagga actgaaggaa       300
     gttagaggat taaggaaatg gcttggaatc ctcaattatg ccagaaatta catccctaat       360
     cttggaaaaa ccttaggacc cttatattca aagacaagtc ctaacgggga aagaagaatg       420
     aatagccagg attgggctat agtcaggagg attaaggaac aagtccttaa cttaccagac       480
     atggagctcc ctccaaagga agcagtcatg ataattgaaa cagatggttg catggaa          537
//