ID   AJ968452; SV 1; linear; genomic DNA; STD; VRL; 537 BP.
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AC   AJ968452;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 3)
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DE   Banana streak Uganda A virus partial reverse transcriptase-RNaseH, clone
DE   44-3
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KW   reverse transcriptase-RNaseH.
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OS   Banana streak UA virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-537
RA   Harper G.;
RT   ;
RL   Submitted (25-APR-2005) to the INSDC.
RL   Harper G., Dept of Disease and Stress Biology, John Innes Centre, Norwich,
RL   NR4 7UH, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1007/s00705-005-0610-1.
RX   PUBMED; 16096705.
RA   Harper G., Hart D., Moult S., Hull R., Geering A., Thomas J.;
RT   "The diversity of Banana streak virus isolates in Uganda";
RL   Arch. Virol. 150(12):2407-2420(2005).
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DR   MD5; 1742e0475b03d8eef4e054727cf880ab.
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FH   Key             Location/Qualifiers
FH
FT   source          1..537
FT                   /organism="Banana streak UA virus"
FT                   /mol_type="genomic DNA"
FT                   /clone="44-3"
FT                   /db_xref="taxon:1016854"
FT   CDS             <1..>537
FT                   /codon_start=1
FT                   /product="reverse transcriptase-RNaseH"
FT                   /function="essential for replication"
FT                   /db_xref="GOA:Q4W0R6"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W0R6"
FT                   /protein_id="CAI91441.1"
FT                   /translation="LKNAPAIFQRKMDHCFHEDFIAVYIDDILVFSETVQQHRQHLKVF
FT                   FDICEKNGLVLSPTKMKIGTRQVDFLGATIGNSRIKLQPHIIKKIADIKDEELKEVRGL
FT                   RKWLGILNYARNYIPNLGKTLGPLYSKTSPNGERRMNGQDWAIVRKIKEQILNLPDMEL
FT                   PPKEAVMIIETDGCME"
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SQ   Sequence 537 BP; 196 A; 92 C; 117 G; 132 T; 0 other;
     ttgaaaaacg ccccagcaat ctttcagaga aaaatggatc attgtttcca tgaagacttc        60
     atagcagtat acattgatga tatcttggtc ttctcagaaa ctgtccagca gcacaggcaa       120
     catctgaagg tattctttga tatttgtgag aaaaatgggt tggtattaag cccaacaaag       180
     atgaaaatag ggacaagaca agtagatttt cttggagcca caattggaaa ttctagaatc       240
     aagcttcaac ctcatataat caagaagata gctgatatta aggatgagga attaaaggaa       300
     gttagaggat tgaggaaatg gcttggaatc ctcaattatg ccagaaatta catccctaat       360
     cttggaaaga ccttaggacc cctatattca aagacaagtc ctaatgggga aagaagaatg       420
     aatggccagg actgggctat agtcaggaag attaaggaac aaatccttaa cttaccagac       480
     atggagctcc ccccaaagga agcagtcatg ataattgaaa cagatggttg catggaa          537
//